| Protein: | gi|7523664, gi|2... |
| Organism: | Arabidopsis thaliana |
| Length: | 370 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7523664, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
436.0 | [0..1] | [370..1] |
|
Region A: Residues: [1-252] |
1 11 21 31 41 51
| | | | | |
1 MSKTLVQPVG QKRLTNVAVV RLKKQGNRFE IACYKNKVLS WRSGVEKDID EVLQSHTVYS 60
61 NVSKGVLAKS KDLMKSFGSD DHTKICIDIL EKGELQVAGK ERESQFSSQF RDIATIVMQK 120
121 TINPETQRPY TISMVERLMH EIHFAVDPHS NSKKQALDVI RELQKHFPIK RSPMRLRLTV 180
181 PVQNFPSLLE KLKEWDGSVV SKDESGTQMS TVCEMEPGLF RECDSHVRSI QGRLEILAVS 240
241 VHAEGDTSMD HY
|
| Detection Method: |  |
| Confidence: | 75.69897 |
| Match: | 1p9qC |
| Description: | Structure of a hypothetical protein AF0491 from Archaeoglobus fulgidus |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [253-370] |
1 11 21 31 41 51
| | | | | |
1 DEHDDMALQT HKPLLPAETE TKDLTDPVVE LSKKLQKQEI STTDNIKQEG GEEKKGTKCS 60
61 TCNTFVGEAK QYREHCKSDW HKHNLKRKTR KLPPISADEC MSEIDMDDSR ADLKDYSF
|
| Detection Method: | |
| Confidence: | 2.0 |
| Match: | 1zu1A |
| Description: | Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.68743405828801 | bayes_pls_golite062009 |
| nucleic acid binding | 3.68045904515072 | bayes_pls_golite062009 |
| DNA binding | 3.67134559212672 | bayes_pls_golite062009 |
| binding | 2.99742524370422 | bayes_pls_golite062009 |
| transcription factor activity | 2.74156749164617 | bayes_pls_golite062009 |
| tubulin binding | 2.50315041918055 | bayes_pls_golite062009 |
| transcription repressor activity | 2.50293208976182 | bayes_pls_golite062009 |
| RNA binding | 2.42316104797971 | bayes_pls_golite062009 |
| microtubule binding | 2.41705231602642 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.22192907025847 | bayes_pls_golite062009 |
| transcription activator activity | 1.65132234119107 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.57041104288348 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.16875264917476 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.02112591326973 | bayes_pls_golite062009 |
| transcription factor binding | 0.992551517825148 | bayes_pls_golite062009 |
| protein binding | 0.952480850696098 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.885270755906501 | bayes_pls_golite062009 |
| chromatin binding | 0.882614685845383 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.757882685828839 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.429714523640337 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.336256827445227 | bayes_pls_golite062009 |
| mRNA binding | 0.286696927901849 | bayes_pls_golite062009 |
| catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
