| Protein: | VIP3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 321 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VIP3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
379.0 | [0..1] | [321..1327] |
|
Region A: Residues: [1-321] |
1 11 21 31 41 51
| | | | | |
1 MKLAGLKSIE NAHEDSVWAA TWVPATEDRP ALLLTGSLDE TVKLWRPDEL DLVRTNTGHS 60
61 LGVAALAAHP SGIIAASSSI DSFVRVFDVD TNATIAVLEA PPSEVWGMQF EPKGTILAVA 120
121 GGSSASVKLW DTASWRLIST LSIPRPDAPK PSDKTSSKKF VLSVAWSPNG KRLACGSMDG 180
181 TICVFDVDRS KLLHQLEGHN MPVRSLVFSP VDPRVLFSGS DDGHVNMHDA EGKTLLGSMS 240
241 GHTSWVLSVD ASPDGGAIAT GSSDRTVRLW DLKMRAAIQT MSNHNDQVWS VAFRPPGGTG 300
301 VRAGRLASVS DDKSVSLYDY S
|
| Detection Method: |  |
| Confidence: | 76.0 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone methyltransferase activity (H3-K4 specific) | 4.71992275913384 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.25521258308263 | bayes_pls_golite062009 |
| GTPase activity | 3.20623818975951 | bayes_pls_golite062009 |
| 3.12192428374026 | bayes_pls_golite062009 | |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| RNA binding | 2.1927334052131 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 2.10926890165617 | bayes_pls_golite062009 |
| transcription regulator activity | 2.10348788067437 | bayes_pls_golite062009 |
| nucleic acid binding | 2.00420268007946 | bayes_pls_golite062009 |
| histone methyltransferase activity | 1.85632145559025 | bayes_pls_golite062009 |
| myosin heavy chain kinase activity | 1.67241027239254 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.53722103498827 | bayes_pls_golite062009 |
| DNA binding | 1.53482914288832 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.35170368882651 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.26395898062853 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| actin binding | 1.08902852052152 | bayes_pls_golite062009 |
| myosin II binding | 0.990046481880222 | bayes_pls_golite062009 |
| actin filament binding | 0.976656531652978 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| type 1 angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| transcription factor activity | 0.897833210520351 | bayes_pls_golite062009 |
| kinase activity | 0.807669232329985 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.805273887494167 | bayes_pls_golite062009 |
| transcription activator activity | 0.724420384084538 | bayes_pls_golite062009 |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.634547834947756 | bayes_pls_golite062009 |
| transcription repressor activity | 0.624053529462119 | bayes_pls_golite062009 |
| protein kinase activity | 0.544118712921054 | bayes_pls_golite062009 |
| transcription factor binding | 0.469377587704245 | bayes_pls_golite062009 |
| snoRNA binding | 0.347797037104681 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.245000508226811 | bayes_pls_golite062009 |
| hydrolase activity | 0.181211933860468 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.0803897416817422 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.0676565515282608 | bayes_pls_golite062009 |
| receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
| kinase binding | 0.0366162235750993 | bayes_pls_golite062009 |
| protein kinase binding | 0.00858004043229577 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.00335766408304172 | bayes_pls_golite062009 |
