| Protein: | SYKC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 626 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYKC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
555.0 | [0..18] | [610..49] |
|
Region A: Residues: [1-626] |
1 11 21 31 41 51
| | | | | |
1 MEGAADQTTK ALSELAMDSS TTLNAAESSA GDGAGPRSKN ALKKEQKMKQ KEEEKRRKDE 60
61 EKAEKAKQAP KASSQKAVAA DDEEMDATQY YENRLKYLAA EKAKGENPYP HKFAVSMSIP 120
121 KYIETYGSLN NGDHVENAEE SLAGRIMSKR SSSSKLFFYD LHGDDFKVQV MADASKSGLD 180
181 EAEFLKLHSN AKRGDIVGVI GFPGKTKRGE LSIFPRSFIL LSHCLHMMPR KADNVNAKKP 240
241 EIWVPGQTRN PEAYVLKDQE SRYRQRHLDM ILNVEVRQIF RTRAKIISYV RRFLDNKNFL 300
301 EVETPMMNMI AGGAAARPFV THHNDLDMRL YMRIAPELYL KQLIVGGLER VYEIGKQFRN 360
361 EGIDLTHNPE FTTCEFYMAF ADYNDLMEMT EVMLSGMVKE LTGGYKIKYN ANGYDKDPIE 420
421 IDFTPPFRRI EMIGELEKVA KLNIPKDLAS EEANKYLIDA CARFDVKCPP PQTTARLLDK 480
481 LVGEFLEPTC VNPTFIINQP EIMSPLAKWH RSKSGLTERF ELFINKHELC NAYTELNDPV 540
541 VQRQRFADQL KDRQSGDDEA MALDETFCNA LEYGLAPTGG WGLGIDRLSM LLTDSLNIKE 600
601 VLFFPAMRPP QEESAAAQAP LTEEKK
|
| Detection Method: |  |
| Confidence: | 147.0 |
| Match: | 1e1oA |
| Description: | Lysyl-tRNA synthetase (LysRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| lysine-tRNA ligase activity | 11.0047124677093 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.89468709683036 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.89468709683036 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.88410036819636 | bayes_pls_golite062009 |
| ligase activity | 6.92073480193262 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 3.80084837437429 | bayes_pls_golite062009 |
| phenylalanine-tRNA ligase activity | 3.4145644216516 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.90150581291897 | bayes_pls_golite062009 |
| glycine-tRNA ligase activity | 2.61548498770105 | bayes_pls_golite062009 |
| structural molecule activity | 2.54582212334303 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 2.52223115725965 | bayes_pls_golite062009 |
| serine-tRNA ligase activity | 2.46505535069103 | bayes_pls_golite062009 |
| threonine-tRNA ligase activity | 2.18642354927 | bayes_pls_golite062009 |
| catalytic activity | 1.99372273395202 | bayes_pls_golite062009 |
| alanine-tRNA ligase activity | 1.82594054955281 | bayes_pls_golite062009 |
| histidine-tRNA ligase activity | 1.72215103383322 | bayes_pls_golite062009 |
| transcription regulator activity | 1.67362693618722 | bayes_pls_golite062009 |
| binding | 1.54403712698597 | bayes_pls_golite062009 |
| nucleic acid binding | 1.48056625237411 | bayes_pls_golite062009 |
| DNA binding | 1.44496421928708 | bayes_pls_golite062009 |
| translation initiation factor activity | 1.27539679024898 | bayes_pls_golite062009 |
| asparagine-tRNA ligase activity | 0.921492123574877 | bayes_pls_golite062009 |
| transcription factor activity | 0.825973629967327 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.77755643935497 | bayes_pls_golite062009 |
| ribonuclease activity | 0.702449673647117 | bayes_pls_golite062009 |
| nuclease activity | 0.29926900436997 | bayes_pls_golite062009 |
