| Protein: | gi|7488395, gi|3... |
| Organism: | Arabidopsis thaliana |
| Length: | 730 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7488395, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
|
365.0 | [0..17] | [721..30] |
|
Region A: Residues: [1-522] |
1 11 21 31 41 51
| | | | | |
1 MGAQKKGGAA ARVSEDAEVQ SRHRLQAILL ADSFATKFRP VTLERPKVLL PIVNVPMIDY 60
61 TLAWLESAGI EEVFVFCCAH SMQVIEYLEK SEWYSHPNLL VRTIESHKSI SAGDALRYMY 120
121 EQQTETSQIQ GDFVLVSGDT VSNMPLADLI QEHRERKKKD EKAIMTMVIK QSKSSPLTHQ 180
181 SRLGTDQLFI AVDPLTKQLL HYEEDKIDHP SGSVCLEKSL LDTNPSVLVC NDMQDCYIDI 240
241 CSPEVLSLFE DNFDYQHLRR HFVKGVLVDD IMGYKIFTHE IHSSYAGRID NFRSYDTVSK 300
301 DIIQRWTYPY VPDINFSGNR PLKLGRQGIY KASDVVQSRS ADVGASTVIG YGTKIGHGDK 360
361 IMNSVIGNGC SIGSNVVIEG SYIWNNVTIE DGCEIRNAIV CDGVKIRAGA VLQPGVVLSF 420
421 NVVVGRDFVV PAYSKVSLLQ QPTTEDSDEE LEYADSSSGT ADHLSGLNLQ MESKASELGP 480
481 DGAGYIWEVC EGAHDEEWKH SVAPIPKDKL SEITQAIDDD DT
|
| Detection Method: |  |
| Confidence: | 67.522879 |
| Match: | 1hv9A |
| Description: | N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain; N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transferase activity | 2.17535315350752 | bayes_pls_golite062009 |
| catalytic activity | 1.88676710996045 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.86990263440735 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.49149681135671 | bayes_pls_golite062009 |
| binding | 1.09657219604879 | bayes_pls_golite062009 |
| protein binding | 0.967722609820275 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 0.796949457473955 | bayes_pls_golite062009 |
| acyltransferase activity | 0.741838450922005 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 0.717805296858439 | bayes_pls_golite062009 |
| UDP-glycosyltransferase activity | 0.619458068514795 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 0.555398952276587 | bayes_pls_golite062009 |
| O-acyltransferase activity | 0.319932817519902 | bayes_pls_golite062009 |
|
Region A: Residues: [523-571] |
1 11 21 31 41 51
| | | | | |
1 DDESVVPTSG ELKSDADSIN TDVNDPNDDY YYFEKEVEGT VLRAVEENI
|
| Detection Method: | |
| Confidence: | 1.39 |
| Match: | 1paqA |
| Description: | CRYSTAL STRUCTURE OF THE CATALYTIC FRAGMENT OF EUKARYOTIC INITIATION FACTOR 2B EPSILON |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [572-730] |
1 11 21 31 41 51
| | | | | |
1 KVDLVTMEIN GLRLSFNMES ADCAGATFFS MIKLALDTPH NSGSELYKNA ASIITKWKDL 60
61 LGFYAKKIDE QIEVIMKFEE MCQESHKELG PLFTQILHLL YDKDVLQEDA ILRWEEEKAG 120
121 ADEADKVYLK QCDTFIQWLK EASEEEDEDD EDEEEEEDN
|
| Detection Method: | |
| Confidence: | 29.0 |
| Match: | 1paqA |
| Description: | CRYSTAL STRUCTURE OF THE CATALYTIC FRAGMENT OF EUKARYOTIC INITIATION FACTOR 2B EPSILON |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation initiation factor activity | 9.37171190530754 | bayes_pls_golite062009 |
| translation regulator activity | 5.35226950142169 | bayes_pls_golite062009 |
| structural molecule activity | 4.37969512292045 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| protein binding | 2.78733902345842 | bayes_pls_golite062009 |
| nucleic acid binding | 2.34284977509828 | bayes_pls_golite062009 |
| RNA binding | 1.98024495780436 | bayes_pls_golite062009 |
| transcription regulator activity | 1.76231475025891 | bayes_pls_golite062009 |
| RNA cap binding | 1.73309326409609 | bayes_pls_golite062009 |
| mRNA binding | 1.71342954033223 | bayes_pls_golite062009 |
| DNA binding | 1.62032607987786 | bayes_pls_golite062009 |
| transcription activator activity | 1.23830945970239 | bayes_pls_golite062009 |
| transcription factor activity | 0.923253759652909 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.803700928110921 | bayes_pls_golite062009 |
| protein phosphatase binding | 0.18767619609331 | bayes_pls_golite062009 |
