| Protein: | gi|25302173, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 618 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25302173, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
332.0 | [0..12] | [609..4] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MIPHQEVNEE EASLFDFLWL LLASVIFVPL FQKIPGGSPV LGYLAAGILI GPYGLSIIRN 60
61 VHGTRAIAEF GVVFLLFNIG LELSVERLSS MKKYVFGLGS AQVLVTAAVV GLLAHYVAGQ 120
121 AGPAAIVIGN GLALSSTAVV LQVLQERGES TSRHGRASFS VLLFQDLAVV VLLILIPLIS 180
181 PNSSKGGIG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [190-296] |
1 11 21 31 41 51
| | | | | |
1 FQAIAEALGL AAVKAAVAIT AIIAGGRLLL RPIYKQIAEN RNAEIFSANT LLVILGTSLL 60
61 TARAGLSMAL GAFLAGLLLA ETEFSLQVES DIAPYRGLLL GLFFMTV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [297-618] |
1 11 21 31 41 51
| | | | | |
1 GMSIDPKLLL SNFPVIVGTL GLLIVGKTML VVIMGKLFGI SIISAIRVGL LLAPGGEFAF 60
61 VAFGEAVNQG IMSPQLSSLL FLVVGISMAI TPWLAAGGQL IASRFELHDV RSLLPVESET 120
121 DDLQGHIIIC GFGRVGQIIA QLLSERLIPF VALDVSSDRV TIGRSLDLPV YFGDAGSKEV 180
181 LHKIGAGRAC AAVVALDAPG ANYRCVWALS KFYPNVKTFV RAHDVVHGLN LEKAGATAVV 240
241 PETLEPSLQL AAAVLAQAKL PTSEIANTIN EFRTRHLSEL TELCEASGSS LGYGYSRTSK 300
301 PKPQPSDASG DNQIIEGGTV VI
|
| Detection Method: | |
| Confidence: | 17.0 |
| Match: | 1lnqA |
| Description: | Potassium channel-related protein MthK |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| potassium channel activity | 7.45561375804942 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 7.44058571110681 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 7.3386698127529 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 7.16469552587678 | bayes_pls_golite062009 |
| voltage-gated channel activity | 7.14063840809955 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 5.93188092092616 | bayes_pls_golite062009 |
| cation channel activity | 5.49362429102263 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 5.13805155650973 | bayes_pls_golite062009 |
| inward rectifier potassium channel activity | 5.0997110076666 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.04374327766634 | bayes_pls_golite062009 |
| ion channel activity | 4.88752793243149 | bayes_pls_golite062009 |
| gated channel activity | 4.87650815860853 | bayes_pls_golite062009 |
| substrate-specific channel activity | 4.76774891791883 | bayes_pls_golite062009 |
| channel activity | 4.7460548761362 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 4.7460548761362 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.64120459994573 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 3.48222081117811 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 2.96809690970616 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 2.94075163359893 | bayes_pls_golite062009 |
| ligand-gated channel activity | 2.94075163359893 | bayes_pls_golite062009 |
| transporter activity | 2.93091397928047 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.82224868778929 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.79688978937497 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.13014428099026 | bayes_pls_golite062009 |
| potassium ion transmembrane transporter activity | 1.34449386905866 | bayes_pls_golite062009 |
| catalytic activity | 1.03099072397093 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.239024094835991 | bayes_pls_golite062009 |
