| Protein: | CAF2P_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 564 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAF2P_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
444.0 | [0..11] | [560..18] |
|
|
442.0 | [0..35] | [546..10] |
|
|
431.0 | [0..24] | [561..29] |
|
|
376.0 | [0..9] | [466..72] |
|
Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MAIVASLRDI NLFSSLPSTP PMADSSSGTF RPAPPIPIPK YAPSNRNRNQ KTNHQTDTNP 60
61 KKPQSNPALK LPHHRTRYYK PVKEGVISSD GDRTILIGDS GVSYQLPGAP FEFQFSYSET 120
121 PKVKPVGIRE PAFMPFAPPT MPRPWTGKAP LKKSKKKIPL FDSFNPPPAG KSGVKYVEMP 180
181 GPLPFG
|
| Detection Method: |  |
| Confidence: | 1.1 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [187-303] |
1 11 21 31 41 51
| | | | | |
1 RYPKEGMNRE EVLGEPLKRW EKGMLIKPHM HDNRQVNLGR DGFTHNMLEL IHSHWKRRRV 60
61 CKVRCKGVPT VDMNNVCRVL EEKTGGEIIH RVGGVVYLFR GRNYNYRTRP QYPLMLW
|
| Detection Method: | |
| Confidence: | 32.39794 |
| Match: | 1jo0A |
| Description: | YhbY homologue HI1333 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [304-432] |
1 11 21 31 41 51
| | | | | |
1 KPAAPVYPKL IQEVPEGLTK EEAHEFRVKG KSLRPICKLS KNGVYVSLVK DVRDAFELSS 60
61 LVKVDCPGLE PSDYKKIGAK LKELVPCVLL SFDDEQILMW RGREWKSRFV DNPLIPSLSE 120
121 TNTTNELDP
|
| Detection Method: | |
| Confidence: | 3.23 |
| Match: | 1rq8A |
| Description: | Solution structure of the hypothetical protein SAV1595 from Staphylococcus aureus, a putative RNA binding protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [433-564] |
1 11 21 31 41 51
| | | | | |
1 SDKPSEEQTV ANPSTTISSP KMISLWQRAL ESSKAVILEE LDLGPDDLLK KVEELEGTSL 60
61 AAEHTYTAMV LSNTDGAAED YVDEKDRSEE YYSDIDDDFD DECSDDESLD PVGPVGSLPV 120
121 DKIVRKLRER LK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
