YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CAF2P_ORYSJ

General Information:
Name(s) found: CAF2P_ORYSJ [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=3 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 607 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPPPPQRPS PSRAGRANLF SSPPPPLPNC YDPKHRRPAP PPLPSARRLP SNRRRRHDQP  60
   61 PNPTTGNGGN PAFRAPHLRT AYRKPVPPVA AAGEGEALLA ADASDAADGR AVVVGPSGLS 120
  121 FRLPGAPFDF RFSYSECPRA PPVAIREPAF LPFAPPTMPR PWTGKAPLLT KEEKARRRGV 180
  181 RLHTPLGEEA PRTVSAHGIM MEVRGRRKLD LARVSPGDGR SREEVLGEPL TAAEVRDLVK 240
  241 PHISHNRQLN IGRDGLTHNM LEMIHCHWRR QEICKVRCRG VPTVDMKNLC YHLEEKSGGK 300
  301 VIHRVGGVVF LYRGRNYNPR TRPRYPLMLW KPATPVYPKL IQEAPEGLTK EEADEMRRRG 360
  361 KDLLPICKLA KNGIYIYLVR DVRDAFEGSD LVKIDCEGLN PSDYKKIGAK LRDLVPCVLL 420
  421 SFDNEQILMF RGKEWKSRYP KPLTLIPKIR KNNVPMSSDE SSSDEATDDD DRLAVREVLR 480
  481 PKMFELWTNA IESSVALMLD DAEVDALTPD SLLTRVEDFS VTSQVVEHSF PAVLVANDES 540
  541 NPDVLNAEYT EDEPETGTLE PQQHEFTESS DVAEDDHFED DMLKRLESSV PLGALPIDAV 600
  601 VKQLNDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..222] MSA 13.164997 View MSA. No confident structure predictions are available.
    2 View Details [223..324] PSI-BLAST 30.30103 YhbY homologue HI1333
    3 View Details [325..484] FFAS03 4.55 Solution structure of the hypothetical protein SAV1595 from Staphylococcus aureus, a putative RNA binding protein
    4 View Details [485..607] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle