| Protein: | CAF2P_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 607 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAF2P_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
503.0 | [0..7] | [607..7] |
|
|
416.0 | [0..47] | [589..18] |
|
|
390.0 | [0..34] | [576..7] |
|
|
381.0 | [0..22] | [606..17] |
|
Region A: Residues: [1-222] |
1 11 21 31 41 51
| | | | | |
1 MSPPPPQRPS PSRAGRANLF SSPPPPLPNC YDPKHRRPAP PPLPSARRLP SNRRRRHDQP 60
61 PNPTTGNGGN PAFRAPHLRT AYRKPVPPVA AAGEGEALLA ADASDAADGR AVVVGPSGLS 120
121 FRLPGAPFDF RFSYSECPRA PPVAIREPAF LPFAPPTMPR PWTGKAPLLT KEEKARRRGV 180
181 RLHTPLGEEA PRTVSAHGIM MEVRGRRKLD LARVSPGDGR SR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [223-324] |
1 11 21 31 41 51
| | | | | |
1 EEVLGEPLTA AEVRDLVKPH ISHNRQLNIG RDGLTHNMLE MIHCHWRRQE ICKVRCRGVP 60
61 TVDMKNLCYH LEEKSGGKVI HRVGGVVFLY RGRNYNPRTR PR
|
| Detection Method: | |
| Confidence: | 30.30103 |
| Match: | 1jo0A |
| Description: | YhbY homologue HI1333 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [325-484] |
1 11 21 31 41 51
| | | | | |
1 YPLMLWKPAT PVYPKLIQEA PEGLTKEEAD EMRRRGKDLL PICKLAKNGI YIYLVRDVRD 60
61 AFEGSDLVKI DCEGLNPSDY KKIGAKLRDL VPCVLLSFDN EQILMFRGKE WKSRYPKPLT 120
121 LIPKIRKNNV PMSSDESSSD EATDDDDRLA VREVLRPKMF
|
| Detection Method: | |
| Confidence: | 4.55 |
| Match: | 1rq8A |
| Description: | Solution structure of the hypothetical protein SAV1595 from Staphylococcus aureus, a putative RNA binding protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [485-607] |
1 11 21 31 41 51
| | | | | |
1 ELWTNAIESS VALMLDDAEV DALTPDSLLT RVEDFSVTSQ VVEHSFPAVL VANDESNPDV 60
61 LNAEYTEDEP ETGTLEPQQH EFTESSDVAE DDHFEDDMLK RLESSVPLGA LPIDAVVKQL 120
121 NDE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
