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Protein Overview: CAF2P_ARATH

General Information:
Name(s) found: CAF2P_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 564 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: Group II intron splicing [IDA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIVASLRDI NLFSSLPSTP PMADSSSGTF RPAPPIPIPK YAPSNRNRNQ KTNHQTDTNP  60
   61 KKPQSNPALK LPHHRTRYYK PVKEGVISSD GDRTILIGDS GVSYQLPGAP FEFQFSYSET 120
  121 PKVKPVGIRE PAFMPFAPPT MPRPWTGKAP LKKSKKKIPL FDSFNPPPAG KSGVKYVEMP 180
  181 GPLPFGRYPK EGMNREEVLG EPLKRWEKGM LIKPHMHDNR QVNLGRDGFT HNMLELIHSH 240
  241 WKRRRVCKVR CKGVPTVDMN NVCRVLEEKT GGEIIHRVGG VVYLFRGRNY NYRTRPQYPL 300
  301 MLWKPAAPVY PKLIQEVPEG LTKEEAHEFR VKGKSLRPIC KLSKNGVYVS LVKDVRDAFE 360
  361 LSSLVKVDCP GLEPSDYKKI GAKLKELVPC VLLSFDDEQI LMWRGREWKS RFVDNPLIPS 420
  421 LSETNTTNEL DPSDKPSEEQ TVANPSTTIS SPKMISLWQR ALESSKAVIL EELDLGPDDL 480
  481 LKKVEELEGT SLAAEHTYTA MVLSNTDGAA EDYVDEKDRS EEYYSDIDDD FDDECSDDES 540
  541 LDPVGPVGSL PVDKIVRKLR ERLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] FFAS03 1.1 No description for 2j63A was found.
    2 View Details [187..303] PSI-BLAST 32.39794 YhbY homologue HI1333
    3 View Details [304..432] FFAS03 3.23 Solution structure of the hypothetical protein SAV1595 from Staphylococcus aureus, a putative RNA binding protein
    4 View Details [433..564] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle