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Protein Overview: CAF1P_ARATH

General Information:
Name(s) found: CAF1P_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 701 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: Group II intron splicing [IDA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKLNTPFP IFAPSLFPNH NPRAPSEIRF SRWGNANAER FEQRRRSQEE LEAEIRRDRR  60
   61 FDAATKIVHT HDSEAAAAEP KTSPFRSRGT PSLPSARSIP GRRSKYSKPD SGPNRPKNKP 120
  121 RVPDSPPQLD AKPEVKLSED GLTYVINGAP FEFKYSYTET PKVKPLKLRE PAYAPFGPTT 180
  181 MGRPWTGRAP LPQSQKTPRE FDSFRLPPVG KKGLKPVQKP GPFRPGVGPR YVYSKEEILG 240
  241 EPLTKEEVRE LVTSCLKTTR QLNMGRDGLT HNMLNNIHDL WKRRRVCKIK CKGVCTVDMD 300
  301 NVCEQLEEKI GGKVIYRRGG VLFLFRGRNY NHRTRPRFPL MLWKPVAPVY PRLIQQVPEG 360
  361 LTRQEATNMR RKGRELMPIC KLGKNGVYCD LVKNVKEAFE VCELVRIDCQ GMKGSDFRKI 420
  421 GAKLKDLVPC VLVSFENEQI LIWRGREWKS SLTTPDKKGD ILEDIEVDTA LPEDDEPSVS 480
  481 PNQSQTMTQN PPLDSMELQN DPDGHDLSPS TVDSSEMEGT INSLQSWSTK DVTEPTVDSF 540
  541 LRDLEEPEDE PETSEEISKQ SIERVLILMK QAVESGTALV LDAADLDADT VFSKAVAFSS 600
  601 VASPGPVFQH GLRKQPTVKK QESQEFGYGD LEAKSSNVVV SRNASKSSNV VVFGKREVAE 660
  661 RGEREEKEEG SKKKMDEFAE DYREVMPHGT LKVDELAKLL A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] deduced N/A No confident structure predictions are available.
    2 View Details [147..240] FFAS03 0.956 Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
    3 View Details [241..349] PSI-BLAST 32.69897 YhbY homologue HI1333
    4 View Details [350..520] FFAS03 2.27 Solution structure of the hypothetical protein SAV1595 from Staphylococcus aureus, a putative RNA binding protein
    5 View Details [521..701] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle