| Protein: | CAF1P_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 701 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAF1P_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
588.0 | [0..82] | [701..5] |
|
|
561.0 | [0..71] | [701..33] |
|
|
442.0 | [0..105] | [555..19] |
|
|
434.0 | [0..88] | [594..31] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MSLKLNTPFP IFAPSLFPNH NPRAPSEIRF SRWGNANAER FEQRRRSQEE LEAEIRRDRR 60
61 FDAATKIVHT HDSEAAAAEP KTSPFRSRGT PSLPSARSIP GRRSKYSKPD SGPNRPKNKP 120
121 RVPDSPPQLD AKPEVKLSED GLTYVI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [147-240] |
1 11 21 31 41 51
| | | | | |
1 NGAPFEFKYS YTETPKVKPL KLREPAYAPF GPTTMGRPWT GRAPLPQSQK TPREFDSFRL 60
61 PPVGKKGLKP VQKPGPFRPG VGPRYVYSKE EILG
|
| Detection Method: | |
| Confidence: | 0.956 |
| Match: | 1q1qA |
| Description: | Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [241-349] |
1 11 21 31 41 51
| | | | | |
1 EPLTKEEVRE LVTSCLKTTR QLNMGRDGLT HNMLNNIHDL WKRRRVCKIK CKGVCTVDMD 60
61 NVCEQLEEKI GGKVIYRRGG VLFLFRGRNY NHRTRPRFPL MLWKPVAPV
|
| Detection Method: | |
| Confidence: | 32.69897 |
| Match: | 1jo0A |
| Description: | YhbY homologue HI1333 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [350-520] |
1 11 21 31 41 51
| | | | | |
1 YPRLIQQVPE GLTRQEATNM RRKGRELMPI CKLGKNGVYC DLVKNVKEAF EVCELVRIDC 60
61 QGMKGSDFRK IGAKLKDLVP CVLVSFENEQ ILIWRGREWK SSLTTPDKKG DILEDIEVDT 120
121 ALPEDDEPSV SPNQSQTMTQ NPPLDSMELQ NDPDGHDLSP STVDSSEMEG T
|
| Detection Method: | |
| Confidence: | 2.27 |
| Match: | 1rq8A |
| Description: | Solution structure of the hypothetical protein SAV1595 from Staphylococcus aureus, a putative RNA binding protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [521-701] |
1 11 21 31 41 51
| | | | | |
1 INSLQSWSTK DVTEPTVDSF LRDLEEPEDE PETSEEISKQ SIERVLILMK QAVESGTALV 60
61 LDAADLDADT VFSKAVAFSS VASPGPVFQH GLRKQPTVKK QESQEFGYGD LEAKSSNVVV 120
121 SRNASKSSNV VVFGKREVAE RGEREEKEEG SKKKMDEFAE DYREVMPHGT LKVDELAKLL 180
181 A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
