| Protein: | SYRM_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 642 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYRM_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..21] | [642..40] |
|
Region A: Residues: [1-642] |
1 11 21 31 41 51
| | | | | |
1 MFIFPKDENR RETLTTKLRF SADHLTFTTV TEKLRATAWR FAFSSRAKSV VAMAANEEFT 60
61 GNLKRQLAKL FDVSLKLTVP DEPSVEPLVA ASALGKFGDY QCNNAMGLWS IIKGKGTQFK 120
121 GPPAVGQALV KSLPTSEMVE SCSVAGPGFI NVVLSAKWMA KSIENMLIDG VDTWAPTLSV 180
181 KRAVVDFSSP NIAKEMHVGH LRSTIIGDTL ARMLEYSHVE VLRRNHVGDW GTQFGMLIEY 240
241 LFEKFPDTDS VTETAIGDLQ VFYKASKHKF DLDEAFKEKA QQAVVRLQGG DPVYRKAWAK 300
301 ICDISRTEFA KVYQRLRVEL EEKGESFYNP HIAKVIEELN SKGLVEESEG ARVIFLEGFD 360
361 IPLMVVKSDG GFNYASTDLT ALWYRLNEEK AEWIIYVTDV GQQQHFNMFF KAARKAGWLP 420
421 DNDKTYPRVN HVGFGLVLGE DGKRFRTRAT DVVRLVDLLD EAKTRSKLAL IERGKDKEWT 480
481 PEELDQTAEA VGYGAVKYAD LKNNRLTNYT FSFDQMLNDK GNTAVYLLYA HARICSIIRK 540
541 SGKDIDELKK TGKLALDHAD ERALGLHLLR FAETVEEACT NLLPSVLCEY LYNLSEHFTR 600
601 FYSNCQVNGS PEETSRLLLC EATAIVMRKC FHLLGITPVY KI
|
| Detection Method: |  |
| Confidence: | 79.39794 |
| Match: | 1bs2A |
| Description: | Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 5.72854650987135 | bayes_pls_golite062009 |
| isoleucine-tRNA ligase activity | 3.76808520367507 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.56893064485672 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| nucleic acid binding | 1.03251266786448 | bayes_pls_golite062009 |
| binding | 0.914435503471172 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.564359271862248 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.30220012698115 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 0.118292082006187 | bayes_pls_golite062009 |
