| Protein: | RUBP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 226 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RUBP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
204.0 | [0..1] | [203..267] |
|
Region A: Residues: [1-226] |
1 11 21 31 41 51
| | | | | |
1 MGNTSDDDKI LSYEDVVLRR SDLDILNGPI FLNDRVIEFY LSFLSTVHSS TTISLIPPSI 60
61 AFWISNCPDT EYLKDFMKPL NLRDKDLLIL PVNDNSNVEV AEGGLHWSLL VYYKEANTFV 120
121 HHDSYMGVNR WSAKQLFKAV SPFVSNGDAS YKECTDTPQQ KNGYDCGVFL LATARVICEW 180
181 FSSGGMKNRD ELWFANVKET VPDLVNHLRE EILALIKKLM SESVSK
|
| Detection Method: |  |
| Confidence: | 34.39794 |
| Match: | 2bkqA |
| Description: | NEDD8 protease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cysteine-type peptidase activity | 5.93560668185539 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 5.48721952122524 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 4.73623517114533 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 3.38737606974088 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 1.90178501880966 | bayes_pls_golite062009 |
| SUMO-specific protease activity | 1.6602460763044 | bayes_pls_golite062009 |
| peptidase activity | 1.39702589518384 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 1.28597643058503 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| protein binding | 0.755467947031123 | bayes_pls_golite062009 |
| hydrolase activity | 0.612664640888088 | bayes_pls_golite062009 |
| binding | 0.426262567794169 | bayes_pls_golite062009 |
| endopeptidase activity | 0.366512660710683 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 0.125393771316362 | bayes_pls_golite062009 |
| NEDD8-specific protease activity | 0.09564496961635 | bayes_pls_golite062009 |
