| Protein: | CSN4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 397 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
243.0 | [0..1] | [397..1] |
|
Region A: Residues: [1-286] |
1 11 21 31 41 51
| | | | | |
1 MDEALTNASA IGDQRQKIEQ YKLILSSVLS SNDLLQAQRF IDHILSDDVP LVVSRQLLQS 60
61 FAQELGRLEP ETQKEIAQFT LTQIQPRVVS FEEQALVIRE KLAGLYESEQ EWSKAAQMLS 120
121 GIDLDSGMRA VDDNFKLSKC IQIARLYLED DDAVNAEAFI NKASFLVSNS QNEVLNLQYK 180
181 VCYARILDMK RKFLEAALRY YGISQIEQRQ IGDEEIDENA LEQALSAAVT CTILAGAGPQ 240
241 RSRVLATLYK DERCSKLKIY PILQKVYLER ILRRPEIDAF SEELRP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [287-397] |
1 11 21 31 41 51
| | | | | |
1 HQKASLPDKS TVLDRAMIEH NLLSASKLYT NIRFDELGTL LAIDPRKAEK IAANMIGQDR 60
61 MRGSIDQEEA VIHFEDDVEE LQQWDQQISG LCQALNDILD GMAKKGMSVP V
|
| Detection Method: | |
| Confidence: | 10.30103 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.09178084244715 | bayes_pls_golite062009 |
| DNA binding | 4.69269372393889 | bayes_pls_golite062009 |
| nucleic acid binding | 4.59221092058767 | bayes_pls_golite062009 |
| transcription factor activity | 4.01234546864709 | bayes_pls_golite062009 |
| binding | 3.52874320222492 | bayes_pls_golite062009 |
| transcription repressor activity | 3.28015281691988 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.23304004014963 | bayes_pls_golite062009 |
| transcription activator activity | 2.21230033124772 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.40206639526766 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.27763700765562 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.12147035668008 | bayes_pls_golite062009 |
| transcription factor binding | 0.78051974537344 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.754042916649094 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| specific transcriptional repressor activity | 0.59003343009795 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.486434906547244 | bayes_pls_golite062009 |
| hydrolase activity | 0.140191206949582 | bayes_pls_golite062009 |
