| Protein: | CH60C_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 572 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CH60C_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
632.0 | [0..32] | [571..2] |
|
Region A: Residues: [1-572] |
1 11 21 31 41 51
| | | | | |
1 MYRVLSKLSS SIGSSTSRKL VSGRIISSRN YAAKDISFGI GARAAMLQGV SEVAEAVKVT 60
61 MGPKGRNVII ESSYGGPKIT KDGVTVAKSI SFQAKAKNIG AELVKQVASA TNKVAGDGTT 120
121 CATVLTQAIL IEGCKSVAAG VNVMDLRVGI NMAIAAVVSD LKSRAVMIST PEEITQVATI 180
181 SANGEREIGE LIARAMEKVG KEGVITVADG NTLDNELEVV EGMKLARGYI SPYFITDEKT 240
241 QKCELENPII LIHEKKISDI NSLLKVLEAA VKSSRPLLIV AEDVESDALA MLILNKHHGG 300
301 LKVCAIKAPG FGDNRKASLD DLAVLTGAEV ISEERGLSLE KIRPELLGTA KKVTVTRDDT 360
361 IILHGGGDKK LIEERCEELR SANEKSTSTF DQEKTQERLS KLSGGVAVFK VGGASESEVG 420
421 ERKDRVTDAL NATRAAVEEG IIPGGGVALL YATKALDNLQ TENEDQRRGV QIVQNALKAP 480
481 AFTIAANAGY DGSLVVGKLL EQDDCNFGFD AAKGKYVDMV KAGIIDPVKV IRTALTDAAS 540
541 VSLLLTTTEA SVLVKADENT PNHVPDMASM GM
|
| Detection Method: |  |
| Confidence: | 171.0 |
| Match: | 1iokA |
| Description: | GroEL, E domain; GroEL, A domain; GroEL, I domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| misfolded protein binding | 2.60932901317399 | bayes_pls_golite062009 |
| unfolded protein binding | 2.43437265897634 | bayes_pls_golite062009 |
| lipopolysaccharide binding | 2.08823822762317 | bayes_pls_golite062009 |
| binding | 2.07154556649829 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 1.90846357786961 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 1.85422470116133 | bayes_pls_golite062009 |
| protein binding | 1.68543685258552 | bayes_pls_golite062009 |
| nucleic acid binding | 1.67284737458957 | bayes_pls_golite062009 |
| DNA binding | 1.53776996197958 | bayes_pls_golite062009 |
| transporter activity | 1.27879339110564 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.08697283907212 | bayes_pls_golite062009 |
| chaperone binding | 0.91200031047441 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.828920415160435 | bayes_pls_golite062009 |
| ATPase activity, coupled | 0.787685249362834 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.75018875403424 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.69634667457441 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.682843768728088 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.680378643689288 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.650832159017275 | bayes_pls_golite062009 |
| ATPase activity | 0.584574936611857 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.573106450426516 | bayes_pls_golite062009 |
| insulin binding | 0.54263404774246 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.44104272460881 | bayes_pls_golite062009 |
| catalytic activity | 0.424959044318554 | bayes_pls_golite062009 |
| cell surface binding | 0.326492680678891 | bayes_pls_golite062009 |
| peptide hormone binding | 0.280457039468896 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.280310103153739 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.275534581026027 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.252704226951294 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.243984617084631 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.205808843369749 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.202279803135899 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.20198255686005 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0778814959589007 | bayes_pls_golite062009 |
| hydrolase activity | 0.0491351110520448 | bayes_pls_golite062009 |
