| Protein: | IMPA8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 441 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IMPA8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
345.0 | [0..9] | [439..77] |
|
Region A: Residues: [1-441] |
1 11 21 31 41 51
| | | | | |
1 MAWKTEVNEV SDDIIDGLWS DDPPLQLESV TKIRRITSQR DISCVIRSGV VPRLVQLLKN 60
61 QVFPKLQYEV AWALTNIAVD NPGVVVNNNA VPVLIQLIAS PKDYVREQAI WTLSNVAGHS 120
121 IHYRDFVLNS GVLMPLLRLL YKDTTLRIAT WALRNLCRGK PHPAFDQVKP ALPALEILLH 180
181 SHDEDVLKNA CMALCHLSEG SEDGIQSVIE AGFVPKLVQI LQLPSPVVLV PALLTIGAMT 240
241 AGNHQQTQCV INSGALPIIS NMLTRNHENK IKKCACWVIS NITAGTKEQI QSVIDANLIP 300
301 ILVNLAQDTD FYMKKEAVWA ISNMALNGSH DQIKYMAEQS CIKQLCDILV YSDERTTILK 360
361 CLDGLENMLK AGEAEKNSED VNPYCLLIED AEGLEKISKL QMNKNDDIYE KAYKILVTNW 420
421 FEEDDENNNN NVRCDDVDFQ V
|
| Detection Method: |  |
| Confidence: | 85.0 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| binding | 2.61658111885029 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| protein binding | 2.13529412360404 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 1.29390474721722 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
| RNA binding | 0.97764812194782 | bayes_pls_golite062009 |
| signal sequence binding | 0.84634722220211 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| nucleic acid binding | 0.169755106399802 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
