| Protein: | gi|8777334, gi|3... |
| Organism: | Arabidopsis thaliana |
| Length: | 442 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8777334, gi|3....
| Description | E-value | Query Range |
Subject Range |
|
|
444.0 | [0..1] | [442..1] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MAMAELSTPK TTSPFLNSSS RLRLSSKLHL SNHFRHLLLP PLHTTTPNSK ISCSVSQNQA 60
61 PVAVQENGLV KTKKECYGV
|
| Detection Method: |  |
| Confidence: | 13.522879 |
| Match: | 1kppA |
| Description: | Tumor susceptibility gene 101 (TSG101) UEV domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [80-442] |
1 11 21 31 41 51
| | | | | |
1 FCLTYDLKAE EETRSWKKLI NIAVSGAAGM ISNHLLFKLA SGEVFGPDQP IALKLLGSER 60
61 SIQALEGVAM ELEDSLFPLL REVDIGTDPN EVFQDVEWAI LIGAKPRGPG MERADLLDIN 120
121 GQIFAEQGKA LNKAASPNVK VLVVGNPCNT NALICLKNAP NIPAKNFHAL TRLDENRAKC 180
181 QLALKAGVFY DKVSNMTIWG NHSTTQVPDF LNARINGLPV KEVITDHKWL EEGFTESVQK 240
241 RGGLLIQKWG RSSAASTAVS IVDAIKSLVT PTPEGDWFST GVYTDGNPYG IEEGLVFSMP 300
301 CRSKGDGDYE LVKDVEIDDY LRQRIAKSEA ELLAEKRCVA HLTGEGIAYC DLGPVDTMLP 360
361 GEV
|
| Detection Method: | |
| Confidence: | 109.0 |
| Match: | 1civA |
| Description: | Malate dehydrogenase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| malate dehydrogenase activity | 7.69241456337154 | bayes_pls_golite062009 |
| L-malate dehydrogenase activity | 3.86701960595079 | bayes_pls_golite062009 |
| malic enzyme activity | 2.98382582538724 | bayes_pls_golite062009 |
| oxidoreductase activity | 2.75947908917144 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 2.58076782195922 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.88605255677599 | bayes_pls_golite062009 |
| catalytic activity | 1.67029398049886 | bayes_pls_golite062009 |
| NAD or NADH binding | 1.32276254629683 | bayes_pls_golite062009 |
| alcohol dehydrogenase (NAD) activity | 1.27032644348698 | bayes_pls_golite062009 |
| retinol dehydrogenase activity | 1.16811519855038 | bayes_pls_golite062009 |
| L-lactate dehydrogenase activity | 1.07211664452474 | bayes_pls_golite062009 |
| lactate dehydrogenase activity | 0.836910434556944 | bayes_pls_golite062009 |
| alcohol dehydrogenase activity, zinc-dependent | 0.729242797855749 | bayes_pls_golite062009 |
| coenzyme binding | 0.59785037604907 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.527946013169731 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor | 0.33551402794014 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH | 0.19685680097448 | bayes_pls_golite062009 |
| malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity | 0.120195861875768 | bayes_pls_golite062009 |
