| Protein: | PSD11_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 419 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSD11_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
227.0 | [0..5] | [405..8] |
|
Region A: Residues: [1-198] |
1 11 21 31 41 51
| | | | | |
1 MVSYRATTET ISLALEANSS EAITILYQVL EDPSSSPEAI RIKEQAITNL CDRLTEEKRG 60
61 EDLRKLLTKL RPFFSLIPKA KTAKIVRGII DAVAKIPGTT DLQITLCKEM VEWTRAEKRT 120
121 FLRQRVEARL AALLMENKEY VEALALLSTL VKEVRRLDDK LLLVDIDLLE SKLHFSLRNL 180
181 PKAKAALTAA RTAANAIY
|
| Detection Method: |  |
| Confidence: | 10.0 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [199-303] |
1 11 21 31 41 51
| | | | | |
1 VPPAQQGTID LQSGILHAEE KDYKTGYSYF FEAFESFNAL GDPRAVFSLK YMLLCKIMVS 60
61 QADDVAGIIS SKAGLQYVGP DLDAMKAVAD AHSKRSLKLF ENALR
|
| Detection Method: | |
| Confidence: | 1.18 |
| Match: | 1qz2A |
| Description: | Crystal Structure of FKBP52 C-terminal Domain complex with the C-terminal peptide MEEVD of Hsp90 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.47078557114818 | bayes_pls_golite062009 |
| catalytic activity | 0.838457647933563 | bayes_pls_golite062009 |
| peptidyl-prolyl cis-trans isomerase activity | 0.788209490718562 | bayes_pls_golite062009 |
| cis-trans isomerase activity | 0.728844238348547 | bayes_pls_golite062009 |
| transcription regulator activity | 0.580453057390609 | bayes_pls_golite062009 |
|
Region A: Residues: [304-419] |
1 11 21 31 41 51
| | | | | |
1 DYKAQLEDDP IVHRHLSSLY DTLLEQNLCR LIEPFSRVEI AHIAELIGLP LDHVEKKLSQ 60
61 MILDKKFAGT LDQGAGCLII FEDPKADAIY SATLETIANM GKVVDSLYVR SAKIMS
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.50995556050336 | bayes_pls_golite062009 |
| nucleic acid binding | 3.38144578566524 | bayes_pls_golite062009 |
| binding | 3.33026160538031 | bayes_pls_golite062009 |
| DNA binding | 3.30822066787723 | bayes_pls_golite062009 |
| transcription factor activity | 2.60537570879007 | bayes_pls_golite062009 |
| hydrolase activity | 2.30467124306022 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.32971938164691 | bayes_pls_golite062009 |
| transcription activator activity | 1.08566311616647 | bayes_pls_golite062009 |
| transcription repressor activity | 0.95491822926452 | bayes_pls_golite062009 |
| protein binding | 0.653872239015235 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.42135864069093 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.136726704233672 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.118016217031359 | bayes_pls_golite062009 |
