| Protein: | gi|6630548, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 416 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6630548, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
263.0 | [0..4] | [415..1] |
|
|
218.0 | [0..8] | [317..1] |
|
|
215.0 | [0..19] | [416..15] |
|
|
201.0 | [0..72] | [375..110] |
|
|
195.0 | [0..101] | [375..28] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MAKMRPSVSL DTWREYFRRG DSDIFGIIDH AIMVAAADWP KEFKSRSDRI AELLFSCKVS 60
61 RCIGCDHLEL SIAGDEAAVE IVGVGGGGDR GDSGVAT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.874 | a.60.14 | Description not found. |
|
Region A: Residues: [98-416] |
1 11 21 31 41 51
| | | | | |
1 GEGEEASVSV DEVMRIRDIL SNKDDEKDSV LLESLRKLES MSMSVDILKD TEIGKAVNGL 60
61 RRHSSDKISK LAKTLFAEWK RLVDQWMNTP EEMAGTEGTP ESLNLSVIDE EEAFPSPPHD 120
121 LDIYAPEPNG FELSQTKCYP DKFPPSSLFH NVLGHLKILD CLDCDGNPRH SVESKHERKS 180
181 QSSAGRRPKG TNDANVVGRY CNDQQTRREE ADVRPMKHSA TDVVEPKRQT KQSREQMVSA 240
241 IQRKPTAVTE QKRKLAGPQQ DKLKALDPDS KFEFAKRKLQ ESYHQHENAK RQRTIQVLET 300
301 IPKQNKVQKP QLKRPATRR
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| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 1pqvS |
| Description: | RNA polymerase II-TFIIS complex |
Matching Structure (courtesy of the PDB): |
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