| Protein: | gi|6630548, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 416 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6630548, gi|1....
| Description | E-value | Query Range |
Subject Range |
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263.0 | [0..4] | [415..1] |
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218.0 | [0..8] | [317..1] |
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215.0 | [0..19] | [416..15] |
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201.0 | [0..72] | [375..110] |
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195.0 | [0..101] | [375..28] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MAKMRPSVSL DTWREYFRRG DSDIFGIIDH AIMVAAADWP KEFKSRSDRI AELLFSCKVS 60
61 RCIGCDHLEL SIAGDEAAVE IVGVGGGGDR GDSGVAT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.874 | a.60.14 | Description not found. |
| View | Download | 0.736 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.685 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.658 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.658 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.614 | a.29.12 | Description not found. |
| View | Download | 0.552 | a.60.14 | Description not found. |
| View | Download | 0.483 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.456 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.455 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.342 | a.228.1 | Description not found. |
| View | Download | 0.264 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
|
Region A: Residues: [98-416] |
1 11 21 31 41 51
| | | | | |
1 GEGEEASVSV DEVMRIRDIL SNKDDEKDSV LLESLRKLES MSMSVDILKD TEIGKAVNGL 60
61 RRHSSDKISK LAKTLFAEWK RLVDQWMNTP EEMAGTEGTP ESLNLSVIDE EEAFPSPPHD 120
121 LDIYAPEPNG FELSQTKCYP DKFPPSSLFH NVLGHLKILD CLDCDGNPRH SVESKHERKS 180
181 QSSAGRRPKG TNDANVVGRY CNDQQTRREE ADVRPMKHSA TDVVEPKRQT KQSREQMVSA 240
241 IQRKPTAVTE QKRKLAGPQQ DKLKALDPDS KFEFAKRKLQ ESYHQHENAK RQRTIQVLET 300
301 IPKQNKVQKP QLKRPATRR
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| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 1pqvS |
| Description: | RNA polymerase II-TFIIS complex |
Matching Structure (courtesy of the PDB): |
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