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Protein Overview: gi|115487514, gi...

General Information:
Name(s) found: gi|77553094 [NCBI NR]
gi|115487514 [NCBI NR]
gi|113648751 [NCBI NR]
gi|108862239 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|77553094|gb|ABA95890.1| hypothetical protein LOC_Os12g06850 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|115487514|ref|NP_001066244.1| Os12g0165700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113648751|dbj|BAF29263.1| Os12g0165700 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108862239|gb|ABA95889.2| transcription elongation factor, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 340 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTDGRLRRA LAAFGGGADV WDLVDAALAS AARDRPAELR ARRDGIVERL YATAAGGRCG  60
   61 NCDAPRSAEP EAAAAAAASP ASPDEDADVD GLDDDEGGGM ESKILAIRDF LEDPDQSEDE 120
  121 LVSLLQSLAD MDITYKALQE TDIGRHVNGL RKHPSGEVRQ LVKLLVRKWK EIVDDWVRLH 180
  181 NSGGDGGSSV LTDGDSPDKI QGRSYQNAQV SDFKYSPSPQ RHNGLSSERS SNNNGVESMI 240
  241 EKRRTSPAPT YHNNKQNNSI GYSTTSSSAP VRTVREQKDN LMDLEKLDSA RKRLQENYQE 300
  301 AQNAKKQRTI QVMDIHDIPK PKNRNAFIRK GGGGLPGKHR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] MSA 2.027984 View MSA. No confident structure predictions are available.
    2 View Details [93..340] PSI-BLAST 29.69897 RNA polymerase II-TFIIS complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle