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Protein Overview: MD26B_ARATH

General Information:
Name(s) found: MD26B_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Probable mediator of RNA polymerase II transcription subunit 26b OS=Arabidopsis thaliana GN=MED26B PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 436 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: transcription [IEA]
    Molecular Function: DNA binding [IEA]
    protein binding [IEA]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASGSLDSW REYFRRRGDS DIFGIIDHAI MVAATDCPNK FKSRRDKIAE LLFSCRVNRC  60
   61 VGCDHLELSV PGDDEANRGT TGNGGGGTAV DEDYEVAGGS KESKANSSRG DNNQIVSNYT 120
  121 FDEAEALSDE IEEFSVVSKE VARIKEILLN KEDEPNSVLL DSLRHLKLMS LNVDILKSTE 180
  181 IGKAVNGLRK HSSDKIRQLA KTLIAEWKEL VDQWVNTTKE ITGAEGTPES ANPSVLDEEE 240
  241 AFPSLPYDVD IFTPEPNGFE ISHFFDSLDF DGNPRNSEEH NTSREHERRP QNIAKRKPEG 300
  301 TQMRIQDAPF RSIKPSSATD FDGTRRPVKQ STEQRMKNET VSVHKSEKPM IQRKPVVTEQ 360
  361 KRKAPGPQQE KLKGLDADAK FEFAKRKLQE SYQHHENAKK QRTIQVLEMI PKQGSAQKPQ 420
  421 LKRPGMSNRN WANGRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] MSA 2.039986 View MSA. No confident structure predictions are available.
    2 View Details [78..436] PSI-BLAST 28.0 RNA polymerase II-TFIIS complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle