| Protein: | MD26B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 436 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MD26B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
236.0 | [0..1] | [428..4] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MKASGSLDSW REYFRRRGDS DIFGIIDHAI MVAATDCPNK FKSRRDKIAE LLFSCRVNRC 60
61 VGCDHLELSV PGDDEAN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [78-436] |
1 11 21 31 41 51
| | | | | |
1 RGTTGNGGGG TAVDEDYEVA GGSKESKANS SRGDNNQIVS NYTFDEAEAL SDEIEEFSVV 60
61 SKEVARIKEI LLNKEDEPNS VLLDSLRHLK LMSLNVDILK STEIGKAVNG LRKHSSDKIR 120
121 QLAKTLIAEW KELVDQWVNT TKEITGAEGT PESANPSVLD EEEAFPSLPY DVDIFTPEPN 180
181 GFEISHFFDS LDFDGNPRNS EEHNTSREHE RRPQNIAKRK PEGTQMRIQD APFRSIKPSS 240
241 ATDFDGTRRP VKQSTEQRMK NETVSVHKSE KPMIQRKPVV TEQKRKAPGP QQEKLKGLDA 300
301 DAKFEFAKRK LQESYQHHEN AKKQRTIQVL EMIPKQGSAQ KPQLKRPGMS NRNWANGRK
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 1pqvS |
| Description: | RNA polymerase II-TFIIS complex |
Matching Structure (courtesy of the PDB): |
|
