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Protein Overview: gi|6630548, gi|1...

General Information:
Name(s) found: gi|6630548 [NCBI NR]
gi|15228385 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|6630548|gb|AAF19567.1|AC011708_10 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15228385|ref|NP_187693.1| transcription elongation factor-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 416 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: transcription [IEA]
    Molecular Function: DNA binding [IEA]
    protein binding [IEA]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKMRPSVSL DTWREYFRRG DSDIFGIIDH AIMVAAADWP KEFKSRSDRI AELLFSCKVS  60
   61 RCIGCDHLEL SIAGDEAAVE IVGVGGGGDR GDSGVATGEG EEASVSVDEV MRIRDILSNK 120
  121 DDEKDSVLLE SLRKLESMSM SVDILKDTEI GKAVNGLRRH SSDKISKLAK TLFAEWKRLV 180
  181 DQWMNTPEEM AGTEGTPESL NLSVIDEEEA FPSPPHDLDI YAPEPNGFEL SQTKCYPDKF 240
  241 PPSSLFHNVL GHLKILDCLD CDGNPRHSVE SKHERKSQSS AGRRPKGTND ANVVGRYCND 300
  301 QQTRREEADV RPMKHSATDV VEPKRQTKQS REQMVSAIQR KPTAVTEQKR KLAGPQQDKL 360
  361 KALDPDSKFE FAKRKLQESY HQHENAKRQR TIQVLETIPK QNKVQKPQLK RPATRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [98..416] PSI-BLAST 33.0 RNA polymerase II-TFIIS complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle