| Protein: | BUB32_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUB32_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
395.0 | [0..2] | [339..1241] |
|
Region A: Residues: [1-339] |
1 11 21 31 41 51
| | | | | |
1 MTLVPAIGRE LSNPPSDGIS NLRFSNNSDH LLVSSWDKSV RLYDANGDLM RGEFKHGGAV 60
61 LDCCFHDDSS GFSVCADTKV RRIDFNAGKE DVLGTHEKPV RCVEYSYAAG QVITGSWDKT 120
121 IKCWDPRGAS GTERTQIGTY MQPERVNSLS LVGNRLVVAT AGRHVNIYDL RNMSQPEQRR 180
181 ESSLKYQTRC VRCYPNGTGY ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV 240
241 YPVNAIAFHP IYGTFASGGC DGFVNIWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAVA 300
301 SSYTFEEGDK PHEPDAIFVR SVNEIEVKPK PKVYPNPPV
|
| Detection Method: |  |
| Confidence: | 74.154902 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| actin binding | 2.27900251096697 | bayes_pls_golite062009 |
| tubulin binding | 2.01759734664395 | bayes_pls_golite062009 |
| microtubule binding | 1.98090681825586 | bayes_pls_golite062009 |
| transcription regulator activity | 1.95667720244696 | bayes_pls_golite062009 |
| nucleic acid binding | 1.90457914882449 | bayes_pls_golite062009 |
| transcription repressor activity | 1.6725482369574 | bayes_pls_golite062009 |
| snoRNA binding | 1.61553185503007 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.59258100795958 | bayes_pls_golite062009 |
| structural molecule activity | 1.47448876401574 | bayes_pls_golite062009 |
| DNA binding | 1.38475369554616 | bayes_pls_golite062009 |
| dynactin binding | 1.29574819250251 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| protein transporter activity | 0.964340340346761 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.963909191437161 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.937944931047515 | bayes_pls_golite062009 |
| dynein binding | 0.92848877230786 | bayes_pls_golite062009 |
| transcription factor activity | 0.804334981068351 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| signal transducer activity | 0.577438981735303 | bayes_pls_golite062009 |
| molecular transducer activity | 0.577438981735303 | bayes_pls_golite062009 |
| actin filament binding | 0.554537899540618 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.535041400676017 | bayes_pls_golite062009 |
| 0.53274018413176 | bayes_pls_golite062009 | |
| transcription factor binding | 0.412844855996155 | bayes_pls_golite062009 |
| receptor activity | 0.322599767074871 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.19391619547146 | bayes_pls_golite062009 |
| hydrolase activity | 0.181211933860468 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.168317261786777 | bayes_pls_golite062009 |
| histone binding | 0.166694897714113 | bayes_pls_golite062009 |
| kinase activity | 0.127621956173205 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
