| Protein: | gi|11994637, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 292 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11994637, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
202.0 | [0..65] | [290..18] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MAQSCLKIVR INNLRNRVNR RILILRRFTR LLWSRIVACT PGKSRRYLLL SRALPSPTVS 60
61 RPSPSPIPAV DVVVGGGGGG GEFVRRSSVV YDNDNSH
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [98-292] |
1 11 21 31 41 51
| | | | | |
1 RRSDSDLVSL KISLLGDPEI GKTSFLAKYV GEEKEVEMRE LEKGINCTDK TLYMGGARIS 60
61 YSIWELEGAE RSRDQIPVAC KDSVAILFMF DLTSRCTLNS VISWYQQARK SNQTAIPVMV 120
121 GTKFDEFIQL PIDLQWTIAS QARTYAKALN ATLFFSSASY NINVNKIFKF VTAKLFDLPW 180
181 TVERNLTIGE PIIDF
|
| Detection Method: | |
| Confidence: | 49.30103 |
| Match: | 2folA |
| Description: | Crystal structure of human RAB1A in complex with GDP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule motor activity | 3.4297361345158 | bayes_pls_golite062009 |
| transporter activity | 3.10463051760206 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.74389108884083 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.67097555143215 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.65161658635465 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.64849912301318 | bayes_pls_golite062009 |
| motor activity | 2.60481158518321 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 2.50494515048649 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 2.39629638016861 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 2.39600931083427 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.36051733655256 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 2.35906629925754 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 2.35679406876731 | bayes_pls_golite062009 |
| ATPase activity | 2.2625504298178 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.24901251684901 | bayes_pls_golite062009 |
| binding | 2.21604035604783 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 1.89320355239381 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 1.88721318481223 | bayes_pls_golite062009 |
| GTP binding | 1.87900088157196 | bayes_pls_golite062009 |
| hydrolase activity | 1.6901766958628 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.65609907941094 | bayes_pls_golite062009 |
| GTPase activity | 1.6309422514633 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.50574672650697 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.3182108176243 | bayes_pls_golite062009 |
| microfilament motor activity | 1.28029120876672 | bayes_pls_golite062009 |
| tubulin binding | 1.01673904002272 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| ATP binding | 0.98146619596929 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.949788783884952 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.931486373329219 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| microtubule binding | 0.902404986889887 | bayes_pls_golite062009 |
| actin binding | 0.875514430441177 | bayes_pls_golite062009 |
| plus-end-directed microtubule motor activity | 0.773586048423911 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.704934361725919 | bayes_pls_golite062009 |
| molecular transducer activity | 0.683309012097319 | bayes_pls_golite062009 |
| signal transducer activity | 0.683309012097319 | bayes_pls_golite062009 |
| protein methyltransferase activity | 0.500054585029736 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 0.36110509588725 | bayes_pls_golite062009 |
| nucleic acid binding | 0.318452816722389 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.282397764628576 | bayes_pls_golite062009 |
| kinase activity | 0.221444513155443 | bayes_pls_golite062009 |
| protein transporter activity | 0.217249710833262 | bayes_pls_golite062009 |
| protein kinase activity | 0.214608777661308 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.208665086324262 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| histone methyltransferase activity | 0.1303395473854 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 5.52757577200247E-4 | bayes_pls_golite062009 |
