| Protein: | SYMC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 797 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYMC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
605.0 | [0..15] | [797..14] |
|
Region A: Residues: [1-737] |
1 11 21 31 41 51
| | | | | |
1 MEDDGKSSPK LPIPGKRNIL ITSALPYVNN VPHLGNIIGC VLSADVYARY CRLRGYNAIY 60
61 ICGTDEYGTA TETKALEENC TPKEICDKYH AIHKEVYDWF GISFDKFGRT STPEQTEVCQ 120
121 AIFNKLWDNK WLSENTMQQL YCDTCKKFLA DRLVEGSCPF EGCNYDSARG DQCEKCGKLL 180
181 NPTELKDPKC KVCQNTPRIR DTDHLFIELP LLKDRLEAYI KKTSVTGSWS QNAIQTTNAW 240
241 LRDGLRQRCI TRDLKWGVPV PHEKYKDKVF YVWFDAPIGY VSITSCYTSE WEKWWKNPEN 300
301 VELYQFMGKD NVPFHTVMFP STQLGTEENW TLMKTISVTE YLNYEDGKFS KSKGVGVFGN 360
361 DVKDTNIPVE VWRYYLLTNR PEVSDTSFSW TDLQAKLNGE LLSNLGNFVN RVLSFIAKPD 420
421 NAGYGSVIPD AHDAESHSLT KSLAEKVEKF VAEYVEAMEK VKLKQGLKTA MLISSEGNYY 480
481 LQASQFWKLY KEDKPLCAVV IRTAAGLVHL LAQLLEPFMP SFSCEVFKQL NLPPQFSLSD 540
541 ERGEVLLASR PWDILPPSHR IGTPQPLFKE LENDEVARYR EKFAGSQSDR RARDEAANLA 600
601 DQLNKTKLSD AKKQKASSKG GGKPKPQPAA DREITMARLD IRVGKIVKAE KHPKADALYV 660
661 EEIDVGGGEI RTVVSGLVKY IPLEEMQNRM VCVLCNLKPA KMRDIVSQAM VLAASSSDGS 720
721 KVELVEPPKT ANIGERV
|
| Detection Method: |  |
| Confidence: | 141.0 |
| Match: | 1rqgA |
| Description: | Methionyl-tRNA synthetase from Pyrococcus abyssi |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 5.54691369460949 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 4.64665624411373 | bayes_pls_golite062009 |
| isoleucine-tRNA ligase activity | 3.76808520367507 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 3.33137779158831 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.50161401062914 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.06535308346284 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| binding | 0.683583881070171 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.625793556381714 | bayes_pls_golite062009 |
| nucleic acid binding | 0.449504767632354 | bayes_pls_golite062009 |
|
Region A: Residues: [738-797] |
1 11 21 31 41 51
| | | | | |
1 TFPGFEGEPD DVLNPKKKVW ETLLVDLNTK ENLVACYKDV PFTTSAGVCK VSSISNGTIR 60
61
|
| Detection Method: | |
| Confidence: | 38.09691 |
| Match: | 1e7zA |
| Description: | EMAP II |
Matching Structure (courtesy of the PDB): |
|
