| Protein: | GDIR_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 240 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDIR_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
312.0 | [0..34] | [239..16] |
|
Region A: Residues: [1-240] |
1 11 21 31 41 51
| | | | | |
1 MSLVSGARDM GFDDNNNNKN NKDGDDENSS SRTRADDDAL SRQMSESSLC ATEEEEDDDS 60
61 KLQLGPQYTI KEHLEKDKDD ESLRKWKEQL LGSVDVTNIG ETLDPEVRID SLAIISPGRP 120
121 DIVLLVPENG NPKGMWFTLK EGSKYNLKFT FHVNNNIVSG LRYTNTVWKT GVKVDRAKEM 180
181 LGTFSPQLEP YNHVMPEETT PSGMFARGSY SARTKFLDDD NKCYLEINYS FDIRKEWPAL 240
241
|
| Detection Method: |  |
| Confidence: | 85.39794 |
| Match: | 1doaB |
| Description: | Rho GDP-dissociation inhibitor 1, RhoGDI |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 4.21900602727099 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.82728537491772 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 2.79599274364249 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 2.7120102542099 | bayes_pls_golite062009 |
| voltage-gated channel activity | 2.70863932585459 | bayes_pls_golite062009 |
| potassium channel activity | 2.69685666968196 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 2.69627305312298 | bayes_pls_golite062009 |
| binding | 2.65544526722793 | bayes_pls_golite062009 |
| cation channel activity | 2.65302958856525 | bayes_pls_golite062009 |
| gated channel activity | 2.52278796517374 | bayes_pls_golite062009 |
| transporter activity | 2.46466249895824 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.37642404692102 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.37262306131842 | bayes_pls_golite062009 |
| substrate-specific channel activity | 2.32502571419352 | bayes_pls_golite062009 |
| channel activity | 2.3181005726144 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 2.3181005726144 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.31677709260544 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.28077016868353 | bayes_pls_golite062009 |
| ion channel activity | 2.2553711462771 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.23522391314947 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.15379228421204 | bayes_pls_golite062009 |
| inward rectifier potassium channel activity | 1.86598930407084 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 1.81486809950722 | bayes_pls_golite062009 |
| ligand-gated channel activity | 1.81486809950722 | bayes_pls_golite062009 |
| Rho GDP-dissociation inhibitor activity | 1.67374100547551 | bayes_pls_golite062009 |
| actin filament binding | 1.67203076960313 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.55727555528218 | bayes_pls_golite062009 |
| protein binding | 1.50286160643298 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.44225801859996 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.42486878565247 | bayes_pls_golite062009 |
| clathrin binding | 1.23902179002817 | bayes_pls_golite062009 |
| molecular transducer activity | 1.12993648323166 | bayes_pls_golite062009 |
| signal transducer activity | 1.12993648323166 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.05880190577068 | bayes_pls_golite062009 |
| GDP-dissociation inhibitor activity | 0.580608094701522 | bayes_pls_golite062009 |
