| Protein: | CLCC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 779 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLCC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
487.0 | [0..11] | [778..28] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MDDRHEGDHH DIEVEGGALH GFERKISGIL DDGSVGFRQP LLARNRKNTT SQIAIVGANT 60
61 CPIESLDY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [69-545] |
1 11 21 31 41 51
| | | | | |
1 EIFENDFFKQ DWRSRKKIEI LQYTFLKWAL AFLIGLATGL VGFLNNLGVE NIAGFKLLLI 60
61 GNLMLKEKYF QAFFAFAGCN LILATAAASL CAFIAPAAAG SGIPEVKAYL NGIDAYSILA 120
121 PSTLFVKIFG SIFGVAAGFV VGKEGPMVHT GACIANLLGQ GGSKKYRLTW KWLRFFKNDR 180
181 DRRDLITCGA AAGVAAAFRA PVGGVLFALE EAASWWRNAL LWRTFFTTAV VAVVLRSLIE 240
241 FCRSGRCGLF GKGGLIMFDV NSGPVLYSTP DLLAIVFLGV IGGVLGSLYN YLVDKVLRTY 300
301 SIINEKGPRF KIMLVMAVSI LSSCCAFGLP WLSQCTPCPI GIEEGKCPSV GRSSIYKSFQ 360
361 CPPNHYNDLS SLLLNTNDDA IRNLFTSRSE NEFHISTLAI FFVAVYCLGI ITYGIAIPSG 420
421 LFIPVILAGA SYGRLVGRLL GPVSQLDVGL FSLLGAASFL GGTMRMTVSL CVILLEL
|
| Detection Method: | |
| Confidence: | 61.69897 |
| Match: | 1kplA |
| Description: | Clc chloride channel |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anion channel activity | 6.77290758049983 | bayes_pls_golite062009 |
| chloride channel activity | 6.77290758049983 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 6.08111514985329 | bayes_pls_golite062009 |
| voltage-gated chloride channel activity | 5.99544422864122 | bayes_pls_golite062009 |
| voltage-gated anion channel activity | 5.99544422864122 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.07840957725271 | bayes_pls_golite062009 |
| ion channel activity | 4.93164650815682 | bayes_pls_golite062009 |
| substrate-specific channel activity | 4.81149777353187 | bayes_pls_golite062009 |
| channel activity | 4.78965126968592 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 4.78965126968592 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.67227438984104 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 4.27956097534048 | bayes_pls_golite062009 |
| voltage-gated channel activity | 4.255638017629 | bayes_pls_golite062009 |
| gated channel activity | 4.1072949331811 | bayes_pls_golite062009 |
| transporter activity | 2.94995161862691 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.84443650880263 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.82470397063503 | bayes_pls_golite062009 |
|
Region A: Residues: [546-779] |
1 11 21 31 41 51
| | | | | |
1 TNNLLMLPLV MLVLLISKTV ADCFNRGVYD QIVTMKGLPY MEDHAEPYMR NLVAKDVVSG 60
61 ALISFSRVEK VGVIWQALKM TRHNGFPVID EPPFTEASEL CGIALRSHLL VLLQGKKFSK 120
121 QRTTFGSQIL RSCKARDFGK AGLGKGLKIE DLDLSEEEME MYVDLHPITN TSPYTVLETL 180
181 SLAKAAILFR QLGLRHLCVV PKTPGRPPIV GILTRHDFMP EHVLGLYPHI DPLK
|
| Detection Method: | |
| Confidence: | 12.09691 |
| Match: | 1vrdA |
| Description: | Crystal structure of Inosine-5'-monophosphate dehydrogenase (TM1347) from THERMOTOGA MARITIMA at 2.18 A resolution |
Matching Structure (courtesy of the PDB): |
|
