| Protein: | SYV_BACSU |
| Organism: | Bacillus subtilis |
| Length: | 880 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYV_BACSU.
| Description | E-value | Query Range |
Subject Range |
|
|
947.0 | [0..5] | [879..5] |
|
Region A: Residues: [1-880] |
1 11 21 31 41 51
| | | | | |
1 METNEQTMPT KYDPAAVEKD RYDFWLKGKF FEAGSDQTKE PYSVVIPPPN VTGRLHLGHA 60
61 WDTTLQDIVT RMKRMQGYDV LWLPGMDHAG IATQAKVEAK LREEGKSRYD LGREKFLEET 120
121 WKWKEEYADF IRSQWAKLGL GLDYSRERFT LDEGLSKAVR EVFVKLYEKG LIYRGEYIIN 180
181 WDPATKTALS DIEVIYKDVQ GAFYHMSYPL ADGSGSIEIA TTRPETMLGD TAVAVHPEDE 240
241 RYKHLIGKTV ILPIVNREIP IVGDDYVDME FGSGAVKITP AHDPNDFELG NRHNLERILV 300
301 MNEDGTMNEN ALQYQGMDRF ECRKKLVKDL QEAGVLFKIE DHMHSVGHSE RSGAVVEPYL 360
361 STQWFVRMQP LADAAIELEK KEEKVNFVPD RFEKTYLHWM ENIRDWCISR QLWWGHRIPA 420
421 WYHKETGELY VGLEAPEDSE NWEQDTDVLD TWFSSALWPF STMGWPDVTA EDFKRYYPTD 480
481 VLVTGYDIIF FWVSRMIFQG IEFTGERPFK DVLIHGLIRD EQGRKMSKSL GNGVDPMDVI 540
541 DKYGADSLRY FLATGSSPGQ DLRFSYEKVE STWNFANKIW NASRFALMNM DGMTYDELDL 600
601 SGEKSVADKW ILTRLNETIE HVTQLADRYE FGEVGRHLYN FIWDDFCDWY IEMAKLPLYG 660
661 EDEAAKKTTR SILAYVLDQT MRLLHPFMPF LTEEIWQHLP HQGESITVSQ WPAVVPEHTD 720
721 TEAAADMKLL VELIRSVRNI RSEVNTPMSK QVELYIKTST DEIASRLEAN RSYVERFTNP 780
781 SVLKIGTDIE AVDKAMTAVV SGAEVILPLE GLINIDEEIA RLQKEFDKLT KEVERVQKKL 840
841 GNEGFMKKAP AHVIDEEREK EKDYVAKRDA VQKRMAELKG
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1gaxA |
| Description: | Valyl-tRNA synthetase (ValRS) C-terminal domain; Valyl-tRNA synthetase (ValRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| valine-tRNA ligase activity | 7.13767629265822 | bayes_pls_golite062009 |
| leucine-tRNA ligase activity | 7.03538514482698 | bayes_pls_golite062009 |
| isoleucine-tRNA ligase activity | 6.38633897147986 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.56893064485672 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.50161401062914 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.625793556381714 | bayes_pls_golite062009 |
| binding | 0.485102284225571 | bayes_pls_golite062009 |
| nucleic acid binding | 0.449504767632354 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.2293846471193 | bayes_pls_golite062009 |
| glutamine-tRNA ligase activity | 0.118292082006187 | bayes_pls_golite062009 |
