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View Structure Prediction Details

Protein: CE35607
Organism: Caenorhabditis elegans
Length: 275 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35607.

Description E-value Query
Range
Subject
Range
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima GN=fabG PE=3 SV=1
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / D...
272.0 [0..3] [262..2]

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Predicted Domain #1
Region A:
Residues: [1-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRFSGKSVI VTGSSSGIGR ATAVLFAKYG AQVTITGRDA GKLEATKKKM LKVMKNPENV  60
   61 CVVVANLTDS DGQDEIVQSA LDAFGRIDVL VNNAGANVVD GTFNTDQSTE LYHKTFQINF 120
  121 EAVIEMVKKT KNHLIESKGE IVNVSSVAAG PQALAPSPYY AASKAALDQY TRCVALDLIL 180
  181 QGVRVNSVSP GVVTSGFLGA MGMSEQVQKQ IEENFTSNRA CIPAGVCGKP EDIAELIIFL 240
  241 ADRKRSSYII GQSIVADGGT SLVSGLTAQN IQRNN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.221849
Match: 1xhlA
Description: Crystal Structure of putative Tropinone Reductase-II from Caenorhabditis Elegans with Cofactor and Substrate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity 3.09625241707629 bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity 3.06391460989761 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 3.02758902218302 bayes_pls_golite062009
retinol dehydrogenase activity 2.50453100919665 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 2.01043991420942 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
steroid dehydrogenase activity 1.75109362865449 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 1.65338499044318 bayes_pls_golite062009
steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.55012034958204 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.47309297191111 bayes_pls_golite062009
fatty acid synthase activity 1.23679054027553 bayes_pls_golite062009
alcohol binding 1.07158175924364 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 1.01627645289834 bayes_pls_golite062009
binding 0.982999356179965 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.881651259721981 bayes_pls_golite062009
retinal dehydrogenase activity 0.69372321031969 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] reductase activity 0.604742541607263 bayes_pls_golite062009
3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity 0.583772223704381 bayes_pls_golite062009
DNA binding 0.525227236870065 bayes_pls_golite062009
nucleic acid binding 0.459537641913493 bayes_pls_golite062009
enoyl-CoA hydratase activity 0.439912268968251 bayes_pls_golite062009
retinol binding 0.343379136183648 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 0.285106352367856 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.258223964404048 bayes_pls_golite062009
transcription regulator activity 0.177044638410302 bayes_pls_golite062009
methylenetetrahydrofolate dehydrogenase activity 0.124826575912808 bayes_pls_golite062009
methenyltetrahydrofolate cyclohydrolase activity 0.118312276550651 bayes_pls_golite062009
ethanol binding 0.0448614072391299 bayes_pls_golite062009

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