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View Structure Prediction Details

Protein: CE33700
Organism: Caenorhabditis elegans
Length: 327 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33700.

Description E-value Query
Range
Subject
Range
gi|57032946 - gi|57032946|gb|AAH88880.1| Agmat-prov protein [Xenopus tropicalis]
310.0 [0..2] [304..99]

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Predicted Domain #1
Region A:
Residues: [1-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSTQLARQ VIRAIGCANG LAGRQLGCEN AVEVIKASTY LAGVQTRLPL EWGKIIEEVN  60
   61 TGRHASAMSG VTQTCRQLAH ETRQVIENKE ELLVFGGDHS CAIGTWSGVA TAMRPVGDIG 120
  121 LIWVDAHMDA HTPDTSDTGN IHGMPVAHLL GFGDKTLVKI GDRLPKLLPH NLCMVGIRDY 180
  181 ESAEQELLEK LGVRIFYAHE VEKRGIQDVM QEAQYLVTRN TIGYGLSIDL DGFDVSYAPA 240
  241 VGTPSADGIN ALEFIKALLT IDLTKLIATE IVEFLPRFDD TQRTSEQLVS SLVEYIYKTK 300
  301 QFQINSVNEI AQRVSTSEQS QKITRAM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.045757
Match: 1cevA
Description: Arginase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
agmatinase activity 3.73238467801147 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.72243397396987 bayes_pls_golite062009
catalytic activity 1.68836803454021 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines 1.01223037319069 bayes_pls_golite062009
protein deacetylase activity 0.94998716163927 bayes_pls_golite062009
histone deacetylase activity 0.905952455299869 bayes_pls_golite062009
deacetylase activity 0.275968925511837 bayes_pls_golite062009
hydrolase activity 0.18398021468136 bayes_pls_golite062009
transcription factor binding 0.12258695349961 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 0.0917282383800223 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle