| Protein: | CE33003 |
| Organism: | Caenorhabditis elegans |
| Length: | 724 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33003.
| Description | E-value | Query Range |
Subject Range |
|
|
537.0 | [0..17] | [724..68] |
|
Region A: Residues: [1-273] |
1 11 21 31 41 51
| | | | | |
1 MVVQTVVHGY PPNTDNETEL LRVRLLRGTK LGKRDLLGVC SPYCMIRLEN SNGDTVDEVQ 60
61 VETKKKTRNP TWNSVFTFRV TRACQMKILV YDENRLRKDV LMGFVSRTLN DGLITTQAPN 120
121 PEEYALQSGT ASKGKSIGSL FLSFHFMPSS SDNSPSDSTA DLQQTSSGMP QGWEEREDGN 180
181 GRTVYVNHAL RTTQFTPPES VSNGNVDAIT EQSVIEETRR RRDNYEHRSQ VTDEPSDTTI 240
241 VSNELTAIDD AMRANFERGG GHVEEEEDEL RLP
|
| Detection Method: |  |
| Confidence: | 33.30103 |
| Match: | 1dqvA |
| Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [274-344] |
1 11 21 31 41 51
| | | | | |
1 DGWDMQVAPN GRTFFIDHRT KTTTWTDPRP GAATRVPLLR GKTDDEIGAL PAGWEQRVHA 60
61 DGRVFFIDHN R
|
| Detection Method: | |
| Confidence: | 4.01 |
| Match: | 1o6wA |
| Description: | Splicing factor prp40 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 7.10194828712949 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 6.82547847405261 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 6.04482261304601 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 5.16615441408338 | bayes_pls_golite062009 |
| transcription regulator activity | 3.182048695645 | bayes_pls_golite062009 |
| binding | 2.56070278040924 | bayes_pls_golite062009 |
| protein binding | 2.42069774848849 | bayes_pls_golite062009 |
| transcription activator activity | 2.05338377709657 | bayes_pls_golite062009 |
| transcription factor binding | 1.94857953695695 | bayes_pls_golite062009 |
| ligase activity | 1.92115554795958 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.79381302696181 | bayes_pls_golite062009 |
| transcription repressor activity | 1.7678419433602 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.67777735708173 | bayes_pls_golite062009 |
| histone methyltransferase activity | 1.67021314973391 | bayes_pls_golite062009 |
| protein methyltransferase activity | 0.9455445085372 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 0.863094487787088 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 0.863094487787088 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 0.863094487787088 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.782679886083722 | bayes_pls_golite062009 |
| transferase activity | 0.385387347513497 | bayes_pls_golite062009 |
| catalytic activity | 0.231344568578849 | bayes_pls_golite062009 |
|
Region A: Residues: [345-724] |
1 11 21 31 41 51
| | | | | |
1 RRTQWEDPRF ENENIAGPAV PYSRDYKRKV EYLRSRLPKP NSNSGKCDMV VHRDTLFEDS 60
61 YRHIMDKKDY DLRNKLWIEF FGETGLDYGG VTREWFFLLS HQIFNPYYGL FEYSATDNYT 120
121 LQINPHSEAC NPEHLSYFHF IGRIIGMAIY HGKLLDAFFI RPFYKMMLGK KITLFDMESV 180
181 DNEYYNSLIY VKDNDPADLE LTFSLDDSIF GETQNIELIP NGANVPVTED NKEEYIEAVV 240
241 PSNLLRLFDA NELELLMCGL QKIDVKDWKA NTIYKGGYGP SSQVVHNFWK CILSFDNEMR 300
301 ARVLQFVSGT SRVPMNGFRE LYGSNGLQKF TIERWGSADM LPRAHTCFNR LDLPPYTTFK 360
361 ELKSKLLTAI ENSEIFSGVD
|
| Detection Method: | |
| Confidence: | 106.0 |
| Match: | 2oniA |
| Description: | No description for 2oniA was found. |
