| Protein: | nas-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 403 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-8.
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..1] | [403..1] |
|
Region A: Residues: [1-255] |
1 11 21 31 41 51
| | | | | |
1 MRRNDLLNNK ITIFLSSLSL FVIIIPIYAA EKDLLPPSTS SETFLTDEDF LRPLNDDETF 60
61 LTEKDFKNGE KLGEDHVPAG SILWKQVYKK GDIRGKAAWK LDPKNSESLR RNGVITGTRK 120
121 WPNGRIPYVI SNQYNDRERA VLARSFQAYH DKTCVRFVPR TAVDNDYLYI GKIDGCYSDV 180
181 GRAGGRQELS LDNGCLQYDT AIHELMHSVG FYHEHERWDR DEHITILWHN IDREAYDQFG 240
241 KVDLAESSYY GQLYD
|
| Detection Method: |  |
| Confidence: | 13.39794 |
| Match: | 1slmA |
| Description: | CRYSTAL STRUCTURE OF FIBROBLAST STROMELYSIN-1: THE C-TRUNCATED HUMAN PROENZYME |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.14857991858078 | bayes_pls_golite062009 |
| protein binding | 0.430901196209551 | bayes_pls_golite062009 |
| signal transducer activity | 0.430096231919693 | bayes_pls_golite062009 |
| molecular transducer activity | 0.430096231919693 | bayes_pls_golite062009 |
| receptor binding | 0.26922218944514 | bayes_pls_golite062009 |
| hydrolase activity | 0.26760389419911 | bayes_pls_golite062009 |
| receptor activity | 0.233571796352905 | bayes_pls_golite062009 |
| protein complex binding | 0.171282539150091 | bayes_pls_golite062009 |
| peptidase activity | 0.129618523753667 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.0544613856966465 | bayes_pls_golite062009 |
|
Region A: Residues: [256-309] |
1 11 21 31 41 51
| | | | | |
1 YYSIMHYDSL AFSKNGFETM VAKQSEMTAV IGAAIDFSPI DILKMNLMYQ CSDV
|
| Detection Method: | |
| Confidence: | 38.39794 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [310-403] |
1 11 21 31 41 51
| | | | | |
1 KLPPTVVGTT DKTIVPVPAP SVTVVEDDCR DRTNLCWRWI DRCKSFFFEQ IMKEFCSLSC 60
61 GYCTPKALQT AKASPPNYSN TLLTKSSTSY LQHG
|
| Detection Method: | |
| Confidence: | 14.39794 |
| Match: | 1nt0A |
| Description: | Mannose-binding protein associated serine protease 2, MASP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 2.52744864351239 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 2.14752073450101 | bayes_pls_golite062009 |
| binding | 2.14092582858845 | bayes_pls_golite062009 |
| protein binding | 1.87564165872234 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 1.86357079348628 | bayes_pls_golite062009 |
| growth factor activity | 0.683947903955495 | bayes_pls_golite062009 |
| signal transducer activity | 0.673391983395207 | bayes_pls_golite062009 |
| molecular transducer activity | 0.673391983395207 | bayes_pls_golite062009 |
| transcription factor binding | 0.5559753867952 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.49319143757878 | bayes_pls_golite062009 |
