| Protein: | elt-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 433 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for elt-2.
| Description | E-value | Query Range |
Subject Range |
|
|
158.0 | [0..11] | [327..1492] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MDNNYNDNVN GWAEMEPSQP MGGLRLPTQN MDPPEQNNES QLSELPRMKI DNDYASPIER 60
61 QSVITSGTNN YEPKVETVTS FFHTGIDYSN FGMLDQTT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [99-238] |
1 11 21 31 41 51
| | | | | |
1 MQPFYPLYSG IPVNTLGTFS GYTNSIYDKP SLYDPSIPTI NIPSTYPTVA PTYECVKCSQ 60
61 SCGAGMKAVN GGMMCVNCST PKTTYSPPVA YSTSLGQPPI LEIPSEQPTA KIAKQSSKKS 120
121 SSSNRGSNGS ASRRQGLVCS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [239-336] |
1 11 21 31 41 51
| | | | | |
1 NCNGTNTTLW RRNAEGDPVC NACGLYFKLH HIPRPTSMKK EGALQTRKRK SKSGDSSTPS 60
61 TSRARERKFE RASSSTEKAQ RSSNRRAGSA KADRELST
|
| Detection Method: | |
| Confidence: | 9.30103 |
| Match: | 2gatA |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.44628241003393 | bayes_pls_golite062009 |
| DNA binding | 1.94519080035201 | bayes_pls_golite062009 |
| nucleic acid binding | 1.85629109425119 | bayes_pls_golite062009 |
| protein binding | 1.72653516930292 | bayes_pls_golite062009 |
| binding | 1.62447538331668 | bayes_pls_golite062009 |
| transcription factor activity | 1.37728257720121 | bayes_pls_golite062009 |
| transcription activator activity | 1.10952708883226 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.78199243307321 | bayes_pls_golite062009 |
| catalytic activity | 0.472235543748473 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.38848912999406 | bayes_pls_golite062009 |
|
Region A: Residues: [337-433] |
1 11 21 31 41 51
| | | | | |
1 AAVAAATATY VSHADLYPVS SAAVTLPDQT YSNYYQWNTA ATAGLMMVPN DQNYVYAATN 60
61 YQTGLRPADN IQVHVMPVQD DETKAAARDL EAVDGDS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
