Protein Overview: RPB1_CAEBR

General Information:
Name(s) found:	RPB1_CAEBR [Swiss-Prot]
Description(s) found: Found 7 descriptions. SHOW ALL	DNA-directed RNA polymerase II subunit RPB1 OS=Caenorhabditis briggsae GN=rpb-1 PE=3 SV=2 [Swiss-Prot]
Organism:	Caenorhabditis briggsae
Length:	1853 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVGVDFQA PLRTVCRVQF GILGPEEIKR MSVAHVEFPE VYENGKPKMG GLMDPRQGVI  60
   61 DRRGRCMTCA GNLTDCPGHF GHLELAKPVF HIGFLTKSLK ILRCVCFYCG RLLIDKTNPR 120
  121 VMDILKKTSG NPKKRLALIY DLCKSKSVCE GAAEKEDGLP DDMDDPMNEG KKVPAGCGRY 180
  181 QPSYRRVGID INAEWKKNVN EDTQERKIML TAERVLEVFK QITDEDILVI GMDPQFARPE 240
  241 WMICTVLPVP PLAVRPAVVT FGSAKNQDDL THKLSDIIKT NQQLQRNEAN GAAAHVLTDD 300
  301 VRLLQYHVAT LVDNCIPGLP TATQKGGRPL KSIKQRLKGK EGRIRGNLMG KRVDFSARTV 360
  361 ITADPNLPID TVGVPRTIAQ NLTFPEIVTP FNVDKLQELV NRGDTQYPGA KYIIRENGAR 420
  421 VDLRYHPRAA DLHLQPGYRV ERHMKDGDII VFNRQPTLHK MSMMGHRVKI LPWSTFRMNL 480
  481 SVTSPYNADF DGDEMNLHLP QSLETRAEIE EIAMVPRQLI TPQANKPVMG IVQDTLCAVR 540
  541 MMTKRDIFID WPFMMDLLMY LPTWDGKVPQ PAILKPKPLW TGKQVFSLII PGNVNVLRTH 600
  601 STHPDSEDSG PYKWISPGDT KVLIEHGELL SGIVCSKTVG KSAGNLLHVV ALELGHEIAA 660
  661 NFYSHIQTVI NAWLLREGHT IGIGDTIADQ STYLDIQNTI RKAKQDVVDV IEKAHNDDLE 720
  721 PTPGNTLRQT FENKVNQILN DARDRTGSSA QKSLSEFNNF KSMVVSGSKG SKINISQVIA 780
  781 CVGQQNVEGK RIPFGFRHRT LPHFIKDDYG PESKGFVENS YLAGLTPSEF FFHAMGGREG 840
  841 LIDTAVKTAE TGYIQRRLIK AMESVMVNYD GTVRNSLAQM VQLRYGEDGL DGMWVENQNM 900
  901 PTMKPNNAVF ERDFRMDLTD NKFLRKNYSE DVVREIQEAQ DGISLVESEW SQLEEDRRLL 960
  961 RKIFPRGDAK IVLPCNLQRL IWNAQKIFKV DLRKPVNLSP LHVINGVREL SKKLIIVSGN1020
 1021 DEISKQAQYN ATLLMNILLR STLCTKKMCT SAKLNTEAFD WLLGEIETRF QQAIAQPGEM1080
 1081 VGALAAQSLG EPATQMTLNT FHYAGVSAKN VTLGVPRLKE IINVSKQLKT PSLTVFLTGA1140
 1141 AAKDPEKAKD VLCKLEHTTL KKVTCNTAIY YDPDPKNTVI AEDEEWVSIF YEMPDHDLTR1200
 1201 TSPWLLRIEL DRKRMVDKKL TMEMIADRIH GGFGQDVHTI YTDDNAEKLV FRLRIAGEDK1260
 1261 GAEGQEEQVD KMEDDVFLRC IEANMLSDLT LQGIPAISKV YMNQPNTDDK KRIIITPEGG1320
 1321 FKAVADWILE TDGTALLRVL SERQIDPVRT TSNDICEIFE VLGIEAVRKS IEKEMDNVIS1380
 1381 FDGSYVNYRH LALLCDVMTA KGHLMAITRH GINRQEVGAL MRCSFEETVD ILMEASVHAE1440
 1441 VDPVKGVSEN IMLGQLARCG TGCFDLVLDV EKCKHGMEIP QNVVMGAGIY GGGFAGSPSR1500
 1501 EFSPAHSPWN SGVTPNYSGP WSPTGGMSPS AGFSPAGNLD GGASPFNEGG WSPASPGDPL1560
 1561 GALSPRTPAY GGMSPGVYSP ASPGFSMTSP HYSPTSPSYS PTSPAHHGQS PVSPSYSPTS1620
 1621 PSYSPTSPSY SPTSPSYSPT SPSYSPTSPS YSPTSPSYSP TSPSYSPTSP SYSPSSPRYS1680
 1681 PTSPTYSPTS PTYSPTSPTY SPTSPTYSPT SPSYEGYSPS SPKYSPSSPT YSPTSPSYSP1740
 1741 TSPQYSPTSP QYSPSSPTYT PSSPTYNPTS PRAFSSPQYS PTSPTYSPTS PSYTPSSPQY1800
 1801 SPTSPTYTPS PADQPGTSNQ YSPSSPTYSP SSPTYSPASP SYSPSSPTYD PQN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: RPB1_CAEBR

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: