| Protein: | ubh-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 249 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ubh-2.
| Description | E-value | Query Range |
Subject Range |
|
|
300.0 | [0..1] | [243..1] |
|
Region A: Residues: [1-249] |
1 11 21 31 41 51
| | | | | |
1 MASATGGWQA LESNPETINP FLSKIGVSGV ECVDVFSFDD EMLQFIPTPQ LALILCFPSS 60
61 GVREFRAKQY EEVEKNGKKP DGIFFMNQKK EIGHACGTFS LFHSLANLEN RVNLGNGKFS 120
121 KWFEKAKLVG EGERSDLLLA DTDLAEAHKE TAEEGETEHP EHVAYHFITY VNKNGQLFEI 180
181 DSCSPFPRPL GATTDSTMIR DAFSTSIKDL MDNVQKLSFS AMALNLFSFK QRYICLVIES 240
241 ISVIYFSRF
|
| Detection Method: |  |
| Confidence: | 76.045757 |
| Match: | 1uchA |
| Description: | DEUBIQUITINATING ENZYME UCH-L3 (HUMAN) AT 1.8 ANGSTROM RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cysteine-type peptidase activity | 6.54685807643041 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 6.39247995905454 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 5.91394445088241 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 4.1832081096766 | bayes_pls_golite062009 |
| peptidase activity | 3.28868056127375 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.01472402774099 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 2.96735553959103 | bayes_pls_golite062009 |
| SUMO-specific protease activity | 2.65263825059319 | bayes_pls_golite062009 |
| hydrolase activity | 2.29464693834116 | bayes_pls_golite062009 |
| endopeptidase activity | 2.26699762664334 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| omega peptidase activity | 1.7955048939859 | bayes_pls_golite062009 |
| binding | 1.77258741259391 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| protein binding | 0.896934807256194 | bayes_pls_golite062009 |
| tubulin binding | 0.75490638344179 | bayes_pls_golite062009 |
| microtubule binding | 0.737305952322311 | bayes_pls_golite062009 |
| NEDD8-specific protease activity | 0.687958315289315 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.467924587720185 | bayes_pls_golite062009 |
| nucleic acid binding | 0.439226369799415 | bayes_pls_golite062009 |
| signal transducer activity | 0.32811477573477 | bayes_pls_golite062009 |
| molecular transducer activity | 0.32811477573477 | bayes_pls_golite062009 |
| calcium-dependent cysteine-type endopeptidase activity | 0.196538841514154 | bayes_pls_golite062009 |
| DNA binding | 0.168761518285256 | bayes_pls_golite062009 |
| transferase activity | 0.0852393573521809 | bayes_pls_golite062009 |
