| Protein: | chn-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 266 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for chn-1.
| Description | E-value | Query Range |
Subject Range |
|
|
217.0 | [0..2] | [265..321] |
|
Region A: Residues: [1-266] |
1 11 21 31 41 51
| | | | | |
1 MSSGAEQHNT NGKKCYMNKR YDDAVDHYSK AIKVNPLPKY YQNRAMCYFQ LNNLKMTEED 60
61 CKRALELSPN EVKPLYFLGN VFLQSKKYSE AISCLSKALY HNAVITNAPD IENALKRARH 120
121 QKYEEEESKR IVQDVEFHTY LESLIEKDRQ ENSENPEELQ RADMAKKRLT ELTLATQEKR 180
181 QNREVPEMLC GKITLELMKE PVIVPSGITY DREEIVQHLR RIGHFDPVTR KPLTENEIIP 240
241 NYALKEVIEK FLDDNPWAKY EPGGMV
|
| Detection Method: |  |
| Confidence: | 30.522879 |
| Match: | 2c2lA |
| Description: | Crystal structure of the CHIP U-box E3 ubiquitin ligase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.97121728620188 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 5.78935175140238 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.75377804653841 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 3.82459130917693 | bayes_pls_golite062009 |
| protein binding | 2.64803540957326 | bayes_pls_golite062009 |
| binding | 2.14721962003828 | bayes_pls_golite062009 |
| SMAD binding | 1.93335489484338 | bayes_pls_golite062009 |
| ubiquitin-ubiquitin ligase activity | 1.37401357060257 | bayes_pls_golite062009 |
| heat shock protein binding | 1.23450221149054 | bayes_pls_golite062009 |
| transcription regulator activity | 1.15544062259083 | bayes_pls_golite062009 |
| unfolded protein binding | 1.03065657981002 | bayes_pls_golite062009 |
| nucleic acid binding | 0.952465452241625 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 0.637551805535732 | bayes_pls_golite062009 |
| ligase activity | 0.63517530468004 | bayes_pls_golite062009 |
| DNA binding | 0.618808911370101 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.549461161056205 | bayes_pls_golite062009 |
| hydrolase activity | 0.52386813728704 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.212156557156054 | bayes_pls_golite062009 |
| peptidase activity | 0.184055035984234 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.159023519781458 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
| transcription factor binding | 0.12026866735209 | bayes_pls_golite062009 |
| transcription activator activity | 0.031505858565037 | bayes_pls_golite062009 |
