| Protein: | pqe-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 558 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MNKRPTSSAS VDSNDDGVHI PAKRMAHASS VPGPSRSKPP MIGAVKNRPN HTEMLDKRNK 60
61 ESEEKRRKDR DELERL
|
| Detection Method: |  |
| Confidence: | 1.03 |
| Match: | 2grxC |
| Description: | No description for 2grxC was found. |
|
Region A: Residues: [77-348] |
1 11 21 31 41 51
| | | | | |
1 RNKKHTTEEE KIKMARLQNA LKVVGKAAGL KATVKKELTG SPAKKQKPAP AVPKILDFSV 60
61 GRTFTAIRQT AIKLVFDTFL ERDSPNAARE AQEFELSIAK QYTDGQKYRI NIGHKVAALR 120
121 KENTSGILEV NKNAVSHDKI LAGGPKDNCT VARGRKTHVD HRQLSIEKLH PLLLQFKLTT 180
181 SELETNAYPM RRDGSTKAVS IADTVYTQNK KMFLDDYDMS RNCSRCNKEF KLSPNGTMIR 240
241 STGICRYHNR GVAINGKRDT FRKRYSCCNE EF
|
| Detection Method: | |
| Confidence: | 0.96 |
| Match: | 1pqvS |
| Description: | RNA polymerase II-TFIIS complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [349-558] |
1 11 21 31 41 51
| | | | | |
1 NVALGCKFSD VHVTDQLFKK ELSTFVSTPV PVPNDQRSTR VYALDCEMVY TIAGPALARL 60
61 TMVDMQRNRV LDVFVKPPTD VLDPNTEFSG LTMEQINSAP DTLKTCHQKL FKYVNADTIL 120
121 IGHSLESDLK AMRVVHKNVI DTAILFRSTR DTKVALKVLS AKLLHKNIQG DNEDAIGHDS 180
181 MEDALTCVDL IFYGLRNPES IAIREANTNC
|
| Detection Method: | |
| Confidence: | 37.69897 |
| Match: | 2guiA |
| Description: | No description for 2guiA was found. |
| Term | Confidence | Notes |
| nuclease activity | 2.65398446409354 | bayes_pls_golite062009 |
| ribonuclease activity | 2.17677493546761 | bayes_pls_golite062009 |
| endoribonuclease activity, producing 5'-phosphomonoesters | 1.74431545836806 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.70600098208524 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.65911933935463 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.59628511603826 | bayes_pls_golite062009 |
| hydrolase activity | 1.52504970608306 | bayes_pls_golite062009 |
| exonuclease activity | 1.4327316829508 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 1.42069917818896 | bayes_pls_golite062009 |
| catalytic activity | 1.25233849524628 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.19753926150484 | bayes_pls_golite062009 |
| 1.18236432793831 | bayes_pls_golite062009 | |
| transcription regulator activity | 1.10433412699603 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04079362397031 | bayes_pls_golite062009 |
| endonuclease activity | 0.991569665925888 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.86862629020506 | bayes_pls_golite062009 |
| DNA binding | 0.860359347662869 | bayes_pls_golite062009 |
| binding | 0.762139256580538 | bayes_pls_golite062009 |
| RNA binding | 0.750194803368593 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.389326716045122 | bayes_pls_golite062009 |
| transcription factor activity | 0.332903382446869 | bayes_pls_golite062009 |
| ribonuclease H activity | 0.244270343650265 | bayes_pls_golite062009 |
| endoribonuclease activity | 0.016619833072142 | bayes_pls_golite062009 |
