YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: spe-8
Organism: Caenorhabditis elegans
Length: 512 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spe-8.

Description E-value Query
Range
Subject
Range
gi|56788733, gi|... - gi|58332784|ref|NP_001011413.1| v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Xenopus (...
393.0 [0..2] [488..14]

Back

Predicted Domain #1
Region A:
Residues: [1-512]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSKSSEGDL QPEDTQSRED KETTATYSED TKPETQKERN AALDNLAKTP IQLVVQPTPL  60
   61 TPAITPCEAP PPPPPPKPSS DNNNSKRLKV KDQLIEVPSD EVGRVENNID NFPFYHGFMG 120
  121 RNECEAMLSN HGDFLIRMTE IGKRVAYVIS IKWKYQNIHV LVKRTKTKKL YWTKKYAFKS 180
  181 ICELIAYHKR NHKPIYEGMT LICGLARHGW QLNNEQVTLN KKLGEGQFGE VHKGSLKTSV 240
  241 FAAPVTVAVK TLHQNHLSAN EKILFLREAN VMLTLSHPNV IKFYGVCTMK EPIMIVMEFC 300
  301 DGKSLEDALL SKEEKVSAED KILYLFHAAC GIDYLHGKQV IHRDIAARNC LLNSKKILKI 360
  361 SDFGLSVKGV AIKERKGGCL PVKYMAPETL KKGLYSTASD IYSYGALMYE VYTDGKTPFE 420
  421 TCGLRGNELR KAIIGKRISL AVEVELPVFI ANIFEQSRQY ETEDRISSKQ IIQIFKEEVG 480
  481 FHEIETSGIL HKLVNSLPRI HNKERKPAAV AV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
protein kinase activity 5.4586557943719 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 5.04467222534257 bayes_pls_golite062009
kinase activity 4.85903980916957 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.63692708178478 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.26787750561728 bayes_pls_golite062009
protein tyrosine kinase activity 2.8153155526437 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
transmembrane receptor activity 2.59526003830791 bayes_pls_golite062009
transmembrane receptor protein kinase activity 2.54265774272269 bayes_pls_golite062009
molecular transducer activity 2.40586892801446 bayes_pls_golite062009
signal transducer activity 2.40586892801446 bayes_pls_golite062009
receptor activity 2.39311927684508 bayes_pls_golite062009
protein binding 2.276111749106 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 2.16831387024372 bayes_pls_golite062009
cytoskeletal protein binding 2.12615078788254 bayes_pls_golite062009
receptor signaling protein activity 2.10379226653669 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.81249386965144 bayes_pls_golite062009
molecular adaptor activity 1.81145713371725 bayes_pls_golite062009
non-membrane spanning protein tyrosine kinase activity 1.66669268613198 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
SH3/SH2 adaptor activity 1.59474164216385 bayes_pls_golite062009
vinculin binding 1.49449787581737 bayes_pls_golite062009
actin binding 1.33479685165255 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
tubulin binding 1.13686658158825 bayes_pls_golite062009
growth factor binding 0.86076618871384 bayes_pls_golite062009
protein binding, bridging 0.83823250804321 bayes_pls_golite062009
microtubule binding 0.734274677384472 bayes_pls_golite062009
transporter activity 0.710766490066447 bayes_pls_golite062009
structural constituent of cytoskeleton 0.612883428421652 bayes_pls_golite062009
transmembrane transporter activity 0.60324822483033 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.499492353295369 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
substrate-specific transporter activity 0.385603245903806 bayes_pls_golite062009
kinase binding 0.26752427107238 bayes_pls_golite062009
MAP kinase activity 0.26024936404169 bayes_pls_golite062009
actin filament binding 0.2403700250846 bayes_pls_golite062009
protein complex binding 0.239339759110451 bayes_pls_golite062009
transforming growth factor beta receptor activity 0.20643152368029 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 0.20643152368029 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.152203945257581 bayes_pls_golite062009
cell adhesion molecule binding 0.150740450460731 bayes_pls_golite062009
insulin receptor binding 0.09784832072622 bayes_pls_golite062009
transforming growth factor beta receptor activity, type I 0.0506751594607393 bayes_pls_golite062009
protein kinase binding 0.00674998152095019 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle