| Protein: | pink-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 641 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pink-1.
| Description | E-value | Query Range |
Subject Range |
|
|
346.0 | [0..4] | [565..26] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MSMKRFGKAA YRIANELVAK GGRLPIFQRF LPRIFPATYN LGVHVVLKKA PFPRQNALRI 60
61 ARLVTR
|
| Detection Method: |  |
| Confidence: | 12.045757 |
| Match: | 2uvmA |
| Description: | No description for 2uvmA was found. |
|
Region A: Residues: [67-486] |
1 11 21 31 41 51
| | | | | |
1 HGRVFRPFSS VIIERHRFQN QNDWRRKFQP IRKELPRNVD LVERIRQIFG NSLRYNEDLK 60
61 STEWPNRIDS YEFGEFLGQG CNAAVYSARL ANSDAESSGN THYGAGFNEV TNILAEIPPV 120
121 SKVAQKKFPL AIKLMFNFEH DRDGDAHLLK SMGNELAPYP NAAKLLNGQM GTFRPLPAKH 180
181 PNVVRIQTAF IDSLKVLPDA IERYPDALHT ARWYESIASE PKTMYVVMRR YRQTLHEYVW 240
241 TRHRNYWTGR VIIAQLLEAC TYLHKHKVAQ RDMKSDNILL EYDFDDEIPQ LVVADFGCAL 300
301 ACDNWQVDYE SDEVSLGGNA KTKAPEIATA VPGKNVKVNF EMADTWAAGG LSYEVLTRSN 360
361 PFYKLLDTAT YQESELPALP SRVNFVARDV IFDLLKRDPN ERVKPNIAAN ALNLSLFRMG 420
421
|
| Detection Method: | |
| Confidence: | 56.0 |
| Match: | 2ptkA |
| Description: | CHICKEN SRC TYROSINE KINASE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein kinase activity | 2.62276884151553 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 2.50483678534826 | bayes_pls_golite062009 |
| binding | 2.30345550898346 | bayes_pls_golite062009 |
| kinase activity | 1.85072548514531 | bayes_pls_golite062009 |
| protein binding | 1.56366829708752 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.41631708186013 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.35441545960336 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.16822929050287 | bayes_pls_golite062009 |
| transferase activity | 0.876865688160088 | bayes_pls_golite062009 |
| catalytic activity | 0.673946834085468 | bayes_pls_golite062009 |
| ATP binding | 0.261039303134118 | bayes_pls_golite062009 |
| nucleotide binding | 0.251407596862474 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.219959447941569 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.215871730509016 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.202000470670323 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.201952708752098 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.199843476277027 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.169343150501543 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.128999677980942 | bayes_pls_golite062009 |
| actin binding | 0.123104851483289 | bayes_pls_golite062009 |
| tubulin binding | 0.121530745814215 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.117998167722028 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.117645147388277 | bayes_pls_golite062009 |
|
Region A: Residues: [487-549] |
1 11 21 31 41 51
| | | | | |
1 EDVKQMMEKC GISQMTTLLA GSSKVLSQKI NSRLDKVMNL ITAETIMANL APHLISRAER 60
61 QLR
|
| Detection Method: | |
| Confidence: | 73.30103 |
| Match: | 2esmA |
| Description: | Crystal Structure of ROCK 1 bound to fasudil |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [550-641] |
1 11 21 31 41 51
| | | | | |
1 ATFLSRMNRE DIWRSLQYFF PAGVQLDTPA TSSDCLETIS SLMSSFSNDS ENYEKQQKPA 60
61 KNGYNNVPLL LRNVIRTDAD GINGIVHRVR SK
|
| Detection Method: | |
| Confidence: | 6.39794 |
| Match: | 2ux0A |
| Description: | No description for 2ux0A was found. |
