| Protein: | ceh-14 |
| Organism: | Caenorhabditis elegans |
| Length: | 351 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ceh-14.
| Description | E-value | Query Range |
Subject Range |
|
|
185.0 | [0..1] | [351..1] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MLGHNILTLG ECDELDNHIV MCSTGLLSPQ EDFSNVNAGH PNNEEAICSL CDKKIRDRFV 60
61 SKVNGRCYHS SCLRCSTCKD ELGATCFLRE DSMYCRAHFY KKFGTKCSSC NEGIVPDHVV 120
121 RKASNHVYHV ECFQCFICKR SLETGEEFYL IADDARL
|
| Detection Method: |  |
| Confidence: | 19.522879 |
| Match: | 2dfyX |
| Description: | No description for 2dfyX was found. |
|
Region A: Residues: [158-241] |
1 11 21 31 41 51
| | | | | |
1 VCKDDYEQAR DKHCNELEGD GSNKRPRTTI SAKSLETLKQ AYQTSSKPAR HVREQLASET 60
61 GLDMRVVQVW FQNRRAKEKR LKKD
|
| Detection Method: | |
| Confidence: | 6.221849 |
| Match: | 1b8iA |
| Description: | Ultrabithorax (ubx) homeodomain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.71840976776163 | bayes_pls_golite062009 |
| DNA binding | 2.61711182194361 | bayes_pls_golite062009 |
| binding | 2.59102816487173 | bayes_pls_golite062009 |
| transcription factor activity | 2.18905180070231 | bayes_pls_golite062009 |
| nucleic acid binding | 1.93681952439958 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.69885241317809 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.35613772918036 | bayes_pls_golite062009 |
| transcription activator activity | 0.9706572970185 | bayes_pls_golite062009 |
| protein binding | 0.853351196918381 | bayes_pls_golite062009 |
| transcription repressor activity | 0.67392957114349 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.44172618015361 | bayes_pls_golite062009 |
| transcription factor binding | 0.22865859991459 | bayes_pls_golite062009 |
| chromatin binding | 0.203837749053719 | bayes_pls_golite062009 |
|
Region A: Residues: [242-351] |
1 11 21 31 41 51
| | | | | |
1 AGRRWKSSNR AESDSNSPIE SINGQSPNYL YLDHPMDDGN ESNYLFHSRE QTPDKYYRNE 60
61 TPSTDPPPMH MTTPSVLTTN FSTPLSLSTN VYNLPPPESQ LIPHMTPQYI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
