| Protein: | CE28327 |
| Organism: | Caenorhabditis elegans |
| Length: | 232 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE28327.
| Description | E-value | Query Range |
Subject Range |
|
|
147.0 | [0..1] | [137..673] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MGPEIERKSH LAYQVARFEA VAMGFPVQYR QVVVEFYYHG RLDGSSGTLA TAVGLLALFT 60
61 GVEISPRFAI TGSLDVFGWP PYCCLFSKMS SGGGNQKSDG QVEEDAAECK FPKEFETTTC 120
121 DALLTAEVYL LLEHRRQSSE SK
|
| Detection Method: |  |
| Confidence: | 35.154902 |
| Match: | 1rr9A |
| Description: | Catalytic domain of E.coli Lon protease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleotidyltransferase activity | 4.54967057318159 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 3.65740283278356 | bayes_pls_golite062009 |
| transferase activity | 3.04205212257097 | bayes_pls_golite062009 |
| transcription regulator activity | 2.31170537288595 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 2.16830676862423 | bayes_pls_golite062009 |
| RNA binding | 2.05527376734941 | bayes_pls_golite062009 |
| binding | 2.02349222243183 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.94887328847363 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.90081280972069 | bayes_pls_golite062009 |
| nucleic acid binding | 1.7414193619112 | bayes_pls_golite062009 |
| DNA binding | 1.58926319237456 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.38725999901881 | bayes_pls_golite062009 |
| ribonuclease activity | 1.31550811238109 | bayes_pls_golite062009 |
| mRNA binding | 1.17402119891853 | bayes_pls_golite062009 |
| structural molecule activity | 1.04534150109805 | bayes_pls_golite062009 |
| catalytic activity | 0.878454819018611 | bayes_pls_golite062009 |
| nuclease activity | 0.69721312877891 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.477960254167 | bayes_pls_golite062009 |
| deacetylase activity | 0.390237258762359 | bayes_pls_golite062009 |
| protein binding | 0.214066724623027 | bayes_pls_golite062009 |
|
Region A: Residues: [143-232] |
1 11 21 31 41 51
| | | | | |
1 DEIEEMSEVF IKTLNYARRM SRFKNRETIR AVRAIFSEKH LHKFEVAQIA NLCPENAEEA 60
61 KALVPSLENK IEESELEEVL KDLQSKRTFQ
|
| Detection Method: | |
| Confidence: | 25.522879 |
| Match: | 2c35A |
| Description: | Subunits Rpb4 and Rpb7 of human RNA polymerase II |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA-directed RNA polymerase activity | 8.43501887532465 | bayes_pls_golite062009 |
| RNA polymerase activity | 8.43501887532465 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 5.88847066010291 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 3.86808684657182 | bayes_pls_golite062009 |
| transferase activity | 3.42143089321218 | bayes_pls_golite062009 |
| transcription regulator activity | 2.4721848902664 | bayes_pls_golite062009 |
| binding | 2.44438550013082 | bayes_pls_golite062009 |
| catalytic activity | 1.17990683373825 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.8583308140751 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.8583308140751 | bayes_pls_golite062009 |
| protein binding | 0.520045897607933 | bayes_pls_golite062009 |
| endoribonuclease activity, producing 5'-phosphomonoesters | 0.430689791429257 | bayes_pls_golite062009 |
| ribonuclease activity | 0.35631508447468 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.288686121121112 | bayes_pls_golite062009 |
| ribonuclease III activity | 0.0092766021353235 | bayes_pls_golite062009 |
