| Protein: | csn-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 495 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for csn-2.
| Description | E-value | Query Range |
Subject Range |
|
|
215.0 | [0..14] | [489..14] |
|
Region A: Residues: [1-495] |
1 11 21 31 41 51
| | | | | |
1 MGDEYMDDDE DYGFEYEDDS GSEPDVDMEN QYYTAKGLRS DGKLDEAIKS FEKVLELEGE 60
61 KGEWGFKALK QMIKITFGQN RLEKMLEYYR QLLTYIKSAV TKNYSEKSIN AILDYISTSR 120
121 QMDLLQHFYE TTLDALKDAK NERLWFKTNT KLGKLFFDLH EFTKLEKIVK QLKVSCKNEQ 180
181 GEEDQRKGTQ LLEIYALEIQ MYTEQKNNKA LKWVYELATQ AIHTKSAIPH PLILGTIREC 240
241 GGKMHLRDGR FLDAHTDFFE AFKNYDESGS PRRTTCLKYL VLANMLIKSD INPFDSQEAK 300
301 PFKNEPEIVA MTQMVQAYQD NDIQAFEQIM AAHQDSIMAD PFIREHTEEL MNNIRTQVLL 360
361 RLIRPYTNVR ISYLSQKLKV SQKEVIHLLV DAILDDGLEA KINEESGMIE MPKNKKKMMV 420
421 TSLVVPNAGD QGTTKSDSKP GTSSEPSTTT SVTSSILQGP PATSSCHQEL SMDGLRVWAE 480
481 RIDSIQSNIG TRIKF
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 2.78419126863783 | bayes_pls_golite062009 |
| binding | 2.71974493738804 | bayes_pls_golite062009 |
| transcription regulator activity | 2.36571535004008 | bayes_pls_golite062009 |
| nucleic acid binding | 2.03244296439384 | bayes_pls_golite062009 |
| DNA binding | 1.95874073664777 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.6361512508718 | bayes_pls_golite062009 |
| protein binding | 1.6279032205159 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.51715099535911 | bayes_pls_golite062009 |
| transcription repressor activity | 1.41858884169884 | bayes_pls_golite062009 |
| transcription factor activity | 1.21805666483342 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.956814399390664 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.562731406491727 | bayes_pls_golite062009 |
| transcription factor binding | 0.518146612491969 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.30464889749774 | bayes_pls_golite062009 |
| transferase activity | 0.127854220687373 | bayes_pls_golite062009 |
| transcription activator activity | 0.0593768116971065 | bayes_pls_golite062009 |
