| Protein: | exos-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 434 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for exos-9.
| Description | E-value | Query Range |
Subject Range |
|
|
342.0 | [0..5] | [432..310] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MRVQPVTNCE KAVILEALKI GKRFDFRSLE EFRDVKLVVG AEVGTAICTI GNTKVMAAVS 60
61 AEIAEPSSMR PHKGVINIDV DLSPMANYAN EHDRLGSKGM ELIRLLELII RDSRCIDVEA 120
121 L
|
| Detection Method: |  |
| Confidence: | 70.69897 |
| Match: | 2nn6A |
| Description: | No description for 2nn6A was found. |
|
Region A: Residues: [122-434] |
1 11 21 31 41 51
| | | | | |
1 CIRAGKEIWK IRVDVRILDE DGSLLDCACL AAITALQHFR RPNVTLEPHH TLIYSEYEKA 60
61 PVPLNIYHMP ICTTIGLLDK GQIVVIDPTD KETACLDGSI VVACNKRREV CALHQSTNLI 120
121 LSTKQIERCV KLAMARAEAL TAVVSDVIKQ DQIERSAFKR PDGFAITTPS LILTAGTTAS 180
181 RQIRAPVIKT EPESFTQRSL YQPSVILNEN PLSVGSVKQE DVDEETLLAE QLTTIQNSVG 240
241 QVEVTEKQTV AVSSRKREVE EVNDLLDGLD DDDEEEEVQT MTLGSETVLN DVPMEEAPDA 300
301 EDSLVNAKKK KKK
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 2oceA |
| Description: | No description for 2oceA was found. |
| Term | Confidence | Notes |
| ribonuclease activity | 7.42330864261751 | bayes_pls_golite062009 |
| exoribonuclease activity | 6.76241588209982 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 6.73428326869965 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 5.13367897180134 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 3.51306349336452 | bayes_pls_golite062009 |
| nucleic acid binding | 3.194200758646 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 3.07263153665399 | bayes_pls_golite062009 |
| ribonuclease H activity | 2.91966688044755 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.73968547121328 | bayes_pls_golite062009 |
| DNA binding | 2.71213098011194 | bayes_pls_golite062009 |
| exonuclease activity | 2.66053639652924 | bayes_pls_golite062009 |
| binding | 2.63617204791771 | bayes_pls_golite062009 |
| RNA binding | 2.41160981373213 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.02605441840546 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.81524862921454 | bayes_pls_golite062009 |
| structural molecule activity | 1.81283970647925 | bayes_pls_golite062009 |
| endoribonuclease activity, producing 5'-phosphomonoesters | 1.74431545836806 | bayes_pls_golite062009 |
| single-stranded DNA binding | 1.62996999055328 | bayes_pls_golite062009 |
| endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.59628511603826 | bayes_pls_golite062009 |
| 1.5765009871268 | bayes_pls_golite062009 | |
| aminoacyl-tRNA ligase activity | 1.35850109411274 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 1.35845277283398 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 1.35845277283398 | bayes_pls_golite062009 |
| excinuclease ABC activity | 1.24466762466323 | bayes_pls_golite062009 |
| exoribonuclease II activity | 1.18248519339188 | bayes_pls_golite062009 |
| transcription regulator activity | 0.996884322431837 | bayes_pls_golite062009 |
| damaged DNA binding | 0.95191912850966 | bayes_pls_golite062009 |
| hydrolase activity | 0.724860465280978 | bayes_pls_golite062009 |
| nuclease activity | 0.57381531077345 | bayes_pls_golite062009 |
| mRNA binding | 0.4162128308402 | bayes_pls_golite062009 |
| ligase activity | 0.346041081217685 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.32084431704638 | bayes_pls_golite062009 |
| transcription factor activity | 0.298729064067577 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 0.24906263529692 | bayes_pls_golite062009 |
| translation regulator activity | 0.22908707234671 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.179682348023561 | bayes_pls_golite062009 |
| aspartate-tRNA ligase activity | 0.151650064901878 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.11625379846973 | bayes_pls_golite062009 |
| RNA polymerase activity | 0.0740938021136293 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 0.0740938021136293 | bayes_pls_golite062009 |
| protein binding | 0.0528188351789111 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.0189279348688405 | bayes_pls_golite062009 |
