| Protein: | fzy-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 507 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fzy-1.
| Description | E-value | Query Range |
Subject Range |
|
|
558.0 | [0..1] | [504..1230] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MNNKGRTPGS AGRTVRSSAQ QNGLTMRKRD MTPTRNTNLL PNATFVGDRF LGVRLDQDEL 60
61 DHANHLMTSK LYSNKENLNN SMSEPNSPEK KSVEGEALKQ MMRHKSTGAL TDADDGDRIL 120
121 CYKKN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [126-507] |
1 11 21 31 41 51
| | | | | |
1 LAPPPAIGYI NQAKVLYSTN SVINPASSVK KSTRHVKETA TKVLDGPGLT KDLYSRHLDW 60
61 GCHNWVAVAL GHELYLWNTE TCVIKNLFED NAPTNEGLIT SVRWSQEGRY ISLGYASGAV 120
121 KIYDPNRPKT TEYVRELRTL RVGGASRCAS IAWRKQGVMT CGYKSGDIVN HDVRISQHVV 180
181 SSWGGDNGHC RDVTALEWSA DENMCVSGSS DRTAKIWDGR HVRGSTVIQD PEPMFTIDEH 240
241 TGQVRTAQFC SFRDGILATG GGINDGTVKL WDVKRQFQKV RELNVCETGG VGGIVFNRPY 300
301 SEMLTASDDG FLRIYRFNAN YKLSHEIQAS NEPIMDLVGS PFDEVLIGDM EETLKVFQLF 360
361 NVDKSTNILD RTAPKNVGLN VR
|
| Detection Method: | |
| Confidence: | 72.69897 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.20122168933317 | bayes_pls_golite062009 |
| dynein binding | 1.70203790763669 | bayes_pls_golite062009 |
| nucleic acid binding | 1.63776917287392 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 1.59258100795958 | bayes_pls_golite062009 |
| transcription regulator activity | 1.56901113625383 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.48624129577934 | bayes_pls_golite062009 |
| actin binding | 1.40054662654509 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| tubulin binding | 1.10875870970504 | bayes_pls_golite062009 |
| DNA binding | 1.0776875611211 | bayes_pls_golite062009 |
| microtubule binding | 1.03769395387791 | bayes_pls_golite062009 |
| transporter activity | 0.692270256454453 | bayes_pls_golite062009 |
| transcription factor activity | 0.541665384827041 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.535041400676017 | bayes_pls_golite062009 |
| transcription repressor activity | 0.371091121886939 | bayes_pls_golite062009 |
| structural molecule activity | 0.254012051644049 | bayes_pls_golite062009 |
| transcription factor binding | 0.244641056034795 | bayes_pls_golite062009 |
| hydrolase activity | 0.181211933860468 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.121183207943714 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.0160791658499004 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
