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View Structure Prediction Details

Protein: CE26009
Organism: Caenorhabditis elegans
Length: 640 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE26009.

Description E-value Query
Range
Subject
Range
gi|106884385, gi... - gi|119947033|ref|YP_944713.1| acetolactate synthase, large subunit, biosynthetic type [Psychromonas ...
572.0 [0..53] [632..1]

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Predicted Domain #1
Region A:
Residues: [1-640]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLFLIIAAI IIGLLLWKWL DVRSTDELTS MVKLLGSGNG QHVLSNAFQV DEKSKRHGGE  60
   61 LVASVLKAHD VEEIFVLCGG HISPILVAAE KLGIKIVDTR HEVTAVFAAD AVARLRQSIG 120
  121 VAAVTAGPGL TNTITAVKNA QMAESPLLLI GGAAPTLLKG RGALQDIDQM VLFRPLCKYV 180
  181 ARVERLRDIV PTVREAIKAA KSGCPGPVFV EFPVDVLYPY ELVVKEIGFN PNAKGFIQRA 240
  241 LNFYLRCHVS RQFGNAWAPQ TITPLPTNIP MPKSEKIQEI VQLVKSAKRP VLLIGSQATL 300
  301 PPVKPADLVK AVEALGCPVF LGGMARGLLG KDHPLQMRQV RRDALKDADL TILAGTVCDF 360
  361 RLSYGRTLSK KSKIVALNRN SSQLTKNEKA FWNSDVSVQA DVATSLVQVA NALGANHTTT 420
  421 PTEWVKSLRE KDDEKESANA KKMEQKLTNG FLNPLNFLRT LDQSLPDDAI LVADGGDFVG 480
  481 SAAYIVRPRG PLQWLDPGAF GTLGVGGGFA LGAKTVYPKR PVYIIWGDGS CGYSLMEYDT 540
  541 FARHKLPVIG IVGNDACWTQ IAREQVPMFQ SSVAVDLART RYDNVAKSLG SWGETIDESN 600
  601 ADSARKILDE ALAVCRSGEQ SALVNVLIGK TDFREGSISV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 143.0
Match: 1ybhA
Description: Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide Chlorimuron Ethyl
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acetolactate synthase activity 12.903449876837 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 12.3239025230705 bayes_pls_golite062009
pyruvate dehydrogenase activity 5.28857071459273 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 5.21233670052586 bayes_pls_golite062009
pyruvate dehydrogenase (acetyl-transferring) activity 5.08663245333808 bayes_pls_golite062009
transketolase activity 2.50501741089295 bayes_pls_golite062009
catalytic activity 2.25537597692103 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors 2.15444163802756 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 1.98546381612935 bayes_pls_golite062009
thiamin pyrophosphate binding 1.87247313698582 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 1.82969293063325 bayes_pls_golite062009
deoxyhypusine synthase activity 1.46517585302326 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 1.0611726850452 bayes_pls_golite062009
protein deacetylase activity 0.882978552120903 bayes_pls_golite062009
histone deacetylase activity 0.881399086357632 bayes_pls_golite062009
cation transmembrane transporter activity 0.78591260444574 bayes_pls_golite062009
hydrolase activity 0.536729211484905 bayes_pls_golite062009
ion transmembrane transporter activity 0.51426028502998 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.492590326775569 bayes_pls_golite062009
oxidoreductase activity 0.459800433209317 bayes_pls_golite062009
transferase activity 0.413024577830522 bayes_pls_golite062009
NAD-dependent histone deacetylase activity 0.38348854354211 bayes_pls_golite062009
NAD-dependent protein deacetylase activity 0.38348854354211 bayes_pls_golite062009
deacetylase activity 0.382228826641711 bayes_pls_golite062009
binding 0.313299160093284 bayes_pls_golite062009
transcription regulator activity 0.217707914161459 bayes_pls_golite062009
nucleic acid binding 0.0424046736878951 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle