| Protein: | ahr-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 602 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ahr-1.
| Description | E-value | Query Range |
Subject Range |
|
|
346.0 | [0..7] | [554..7] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MYASKRRQRN FKRVRDPPKQ LTNTNPSKRH RERLNGELET VAMLLPYDSS TISRLDKLSV 60
61 LRLAVSFLQC KAHFQACLHN SQFLSAGFPM STHSYSYQPH PPIPFSNKV
|
| Detection Method: |  |
| Confidence: | 8.39794 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.17840258752324 | bayes_pls_golite062009 |
| DNA binding | 2.56280954568684 | bayes_pls_golite062009 |
| transcription regulator activity | 2.54719844409677 | bayes_pls_golite062009 |
| nucleic acid binding | 2.42823673922558 | bayes_pls_golite062009 |
| transcription factor activity | 2.29471798726915 | bayes_pls_golite062009 |
| protein binding | 1.59929864805879 | bayes_pls_golite062009 |
| transcription factor binding | 0.78456571881611 | bayes_pls_golite062009 |
| transcription activator activity | 0.537618291807254 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.39197881175959 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.3402368922433 | bayes_pls_golite062009 |
|
Region A: Residues: [110-515] |
1 11 21 31 41 51
| | | | | |
1 PTIFDLRIGT PMLDPEESNF EEISLKSLGG FILVLNDNGE IYYASENVEN YLGFHQSDVL 60
61 HQPVYDLIHS EDRDDIRQQL DSNFHIPTSS ASNQFDVFAP QNSKYLERNV NARFRCLLDN 120
121 TCGFLRIDMR GKLMSLHGLP SSYVMGRTAS GPVLGMICVC TPFVPPSTSD LASEDMILKT 180
181 KHQLDGALVS MDQKVYEMLE IDETDLPMPL YNLVHVEDAV CMAEAHKEAI KNGSSGLLVY 240
241 RLVSTKTRRT YFVQSSCRMF YKNSKPESIG LTHRLLNEVE GTMLLEKRST LKAKLLSFDD 300
301 SFLQSPRNLQ STAALPLPSV LKDDQDCLEP STSNSLFPSV PVPTPTTTKA NRRRKENSHE 360
361 IVPTIPSIPI PTHFDMQMFD PSWNHGVHPP AWPHDVYHLT QYPPTY
|
| Detection Method: | |
| Confidence: | 50.69897 |
| Match: | 1wa9A |
| Description: | Crystal Structure of the PAS repeat region of the Drosophila clock protein PERIOD |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [516-602] |
1 11 21 31 41 51
| | | | | |
1 PHPPGTVGYP DVQIAPVDYP GWHPNDIHMT QLPHGFTPDA QKLVPPHPQM SHFTEYPTPS 60
61 THHDLHHHPL KQDNFHLISE VTNLLGT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
