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View Structure Prediction Details

Protein: CE17734
Organism: Caenorhabditis elegans
Length: 180 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17734.

Description E-value Query
Range
Subject
Range
gi|62751879, gi|... - gi|89269971|emb|CAJ81623.1| psf2, Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) [Xenopus ...
246.0 [0..1] [178..1]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAERCEFIA GNSLIEVIPS ISDDRPIHLI SGDIGPFEAG VPCRIPVWTA ILMKRKHNCK  60
   61 VVAPQWMDVD ELKKILTSET ESQGLAKLPD HFFEISHMLV RDAREDIFEV EAVKSLVQDI 120
  121 YDRRDAKLRS SAIEFLRQNQ TCHAQLDNVQ LIEASSARAT LEACRQMGAV VRNKHESTPL 180
  181 

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Detection Method: PSI-BLAST
Confidence: 64.0
Match: 2q9qA
Description: No description for 2q9qA was found.

Predicted functions:

Term Confidence Notes
3'-5' DNA helicase activity 3.30007058745861 bayes_pls_golite062009
DNA helicase activity 2.7662250039458 bayes_pls_golite062009
binding 1.71578680186328 bayes_pls_golite062009
transcription regulator activity 1.2336233528067 bayes_pls_golite062009
helicase activity 1.2110072302388 bayes_pls_golite062009
protein binding 0.495328779211482 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.406116199163083 bayes_pls_golite062009
pyrophosphatase activity 0.350000641617868 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.33576520693158 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.333445385039412 bayes_pls_golite062009
catalytic activity 0.161911144249814 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle