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View Structure Prediction Details

Protein: CE16882
Organism: Caenorhabditis elegans
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16882.

Description E-value Query
Range
Subject
Range
gi|25308071 - pir||AI3294 cell division protein ftsH (EC 3.4.24.-) [imported] - Brucella melitensis (strain 16M)
gi|17982240, gi|... - gi|17986626|ref|NP_539260.1| cell division protein FTSH [Brucella melitensis 16M], gi|17982240|gb|AA...
328.0 [0..39] [443..151]

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Predicted Domain #1
Region A:
Residues: [1-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSPIRSKLQ YLQVQRFLVT LSDAYSKKVN EGTLKEDDYQ RKMIVDFERL RKEIESYQPT  60
   61 NKSNISEKSS SRFWKMFQNS KVDTPKIISP RGIYLYGSVG CGKTMLMDLF FENCPIDKKR 120
  121 RVHFNDFMQN VHKRMHELKM QSNKARGKFD PVPVIVDEIM ETTNLLCFDE FQVTDIADAM 180
  181 ILKRFFSMLF DRGLVMVATS NRAPSELYKN GLQRHQFMPF ITILEDKCAS LALDSGMDYR 240
  241 RSAAGDGNHV YFSSEDSNTQ CDIVFKQSAA NENDTVRSKT LEILGRRVIV EKCCGGVADV 300
  301 DFKELCMTAK GAVDYLVYAR VFHTVIVRNI PIMNQDMWNA MRRFITMIDT FYDQKVRVVI 360
  361 GAAAPLDELF QFEGHNTSHD ALSDSKRMLM DDLGIKSDHE GMSANVFSGD EEAFAYSRTV 420
  421 SRLYEMQTEK YRRQRRPYNA TEDSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.09691
Match: 2ce7A
Description: EDTA treated
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transporter activity 3.10463051760206 bayes_pls_golite062009
transmembrane transporter activity 2.95886887664984 bayes_pls_golite062009
nucleoside-triphosphatase activity 2.74389108884083 bayes_pls_golite062009
pyrophosphatase activity 2.67097555143215 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 2.65161658635465 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 2.64849912301318 bayes_pls_golite062009
active transmembrane transporter activity 2.50494515048649 bayes_pls_golite062009
primary active transmembrane transporter activity 2.39629638016861 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 2.39600931083427 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 2.36051733655256 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 2.35906629925754 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 2.35679406876731 bayes_pls_golite062009
hydrolase activity 2.32318595170495 bayes_pls_golite062009
ATPase activity 2.2625504298178 bayes_pls_golite062009
ATPase activity, coupled 2.24901251684901 bayes_pls_golite062009
binding 2.0681607836408 bayes_pls_golite062009
substrate-specific transporter activity 1.65609907941094 bayes_pls_golite062009
protein transporter activity 1.37245678118001 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 1.3182108176243 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
purine nucleotide binding 0.929901285538132 bayes_pls_golite062009
nucleotide binding 0.922442819194247 bayes_pls_golite062009
purine ribonucleotide binding 0.920987930180051 bayes_pls_golite062009
ribonucleotide binding 0.920926158369519 bayes_pls_golite062009
motor activity 0.70874549510465 bayes_pls_golite062009
ion transmembrane transporter activity 0.704934361725919 bayes_pls_golite062009
guanyl nucleotide binding 0.640772201693186 bayes_pls_golite062009
guanyl ribonucleotide binding 0.63468044350616 bayes_pls_golite062009
GTP binding 0.621689261700018 bayes_pls_golite062009
protein transmembrane transporter activity 0.46552249844591 bayes_pls_golite062009
GTPase activity 0.437665353870877 bayes_pls_golite062009
ATP binding 0.41092997612902 bayes_pls_golite062009
adenyl ribonucleotide binding 0.385813421701492 bayes_pls_golite062009
adenyl nucleotide binding 0.377870145186619 bayes_pls_golite062009
nucleic acid binding 0.318452816722389 bayes_pls_golite062009
cation transmembrane transporter activity 0.282397764628576 bayes_pls_golite062009
protein binding 0.193768631623192 bayes_pls_golite062009
P-P-bond-hydrolysis-driven protein transmembrane transporter activity 0.00571427458217011 bayes_pls_golite062009
macromolecule transmembrane transporter activity 0.00571427458217011 bayes_pls_golite062009

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